Aeromonas sanarellii: KXJ75_21320
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Entry
KXJ75_21320 CDS
T08465
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
asaa
Aeromonas sanarellii
Brite
KEGG Orthology (KO) [BR:
asaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asaa03009
]
KXJ75_21320 (rlmD)
Enzymes [BR:
asaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KXJ75_21320 (rlmD)
Ribosome biogenesis [BR:
asaa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KXJ75_21320 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
Methyltransf_15
PrmA
Cons_hypoth95
Methyltransf_11
PCMT
TRM5-TYW2_MTfase
N6_Mtase
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QXW29104
LinkDB
All DBs
Position
complement(4496324..4497676)
Genome browser
AA seq
450 aa
AA seq
DB search
MPLVGHQHRIDILELTDKGDGKGRLFDRPLFVEGLLPGEQALVELTEVKPNYLHGKLVEL
IGPSADRVPDFCPNTECGGCQVRPLAYPAQLALKQTLVQSALEQVGLGETIVNPILGMDS
PFAYRNKAQYAVRGSEAGAEIGFYRKHSHDLITADDCAVQDSLHVELNARVRQWMREHEV
AAYDEVAHTGCIRNLMTRKGFKSGELMVVLVTLGEELPFEAELLACLSDLPVTTLVQNIN
GERTNRILGDKNRVLLGSGVIRDKIHELEFEISPLSFFQNNPGQTDVLYSKALEYCELTG
SETVFDIYCGIGTISLFLAGKTARVVGIESVESAISDARRNAALNGIEHTEFHVGKAEQL
MPVLHADGVTADVVVMDPPRKGCDKAVLQTLVAMAPRRLVYVSCNPQTLARDLAWLVKQG
FVLDEVQPVDMFPHSMHVEAVARLSLPAKA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgccgttagtgggacaccaacatcggatcgatattctggaactgaccgacaagggggat
ggcaagggtcgcctgttcgatcgccccctgtttgtcgagggtctgctgcccggtgagcag
gcgttggtcgagttgaccgaggtcaagcccaactacctgcacggcaagctggtcgagctg
atcgggccctctgccgatcgggtgcccgatttctgccccaacacagagtgcggtggctgc
caggtgcgcccgctggcctacccggcccagctcgctctcaagcagactctagtgcagagc
gcgctggaacaggtggggctgggcgagaccatcgtcaatcccatcctcggcatggacagc
cccttcgcctaccgtaacaaggcgcagtatgccgtgcgcggcagcgaggcgggggccgag
atcggcttctatcgcaagcactcccacgatctcatcaccgccgacgattgcgcggtgcag
gactcgctccacgtcgagctcaacgcccgggtgcgccagtggatgcgcgagcacgaggtc
gcggcctacgacgaggtggcccacaccggctgcatacgcaacctgatgacccgcaagggc
ttcaagagcggcgagctgatggtggtgctggtgaccctgggcgaggagctgccgttcgag
gccgagttgctggcgtgcttaagcgatctgcccgtcactaccctggtgcagaacatcaat
ggcgaacgcaccaaccgcatcctgggcgacaagaaccgggtgctgctgggtagcggggtg
atccgcgacaagatccacgagctcgagttcgagatctcgcccctctccttcttccagaac
aatccgggccagaccgacgtgctctactccaaggcgctggaatattgcgagctgaccggc
agcgagacggtgttcgacatctattgcggaatcggcaccatctccctgttcctggcgggc
aagaccgccagggtggtggggatagagtcggtggagagcgccatcagcgacgcccgccgc
aacgcggccctgaacggcatcgagcacaccgaattccacgtgggcaaggcggagcagctg
atgcccgtgctgcatgccgacggcgtgaccgccgacgtggtggtgatggatcccccccgc
aagggttgtgacaaggcggtgctgcagaccctggtcgccatggccccgcgccggttggtc
tatgtctcctgcaacccgcagaccctggcccgggatctcgcctggctggtcaaacagggc
ttcgtgctggacgaggtgcagccggtggacatgttcccgcactccatgcacgtcgaagcg
gtcgctcgtctgagcctgccggccaaggcctga
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