Aeromonas sanarellii: KXJ75_21960
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Entry
KXJ75_21960 CDS
T08465
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
asaa
Aeromonas sanarellii
Pathway
asaa02020
Two-component system
asaa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KXJ75_21960
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KXJ75_21960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asaa03021
]
KXJ75_21960
Transcription machinery [BR:
asaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KXJ75_21960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
TetR_C_5-like
Motif
Other DBs
NCBI-ProteinID:
QXW29212
LinkDB
All DBs
Position
complement(4618301..4619740)
Genome browser
AA seq
479 aa
AA seq
DB search
MKPTLQLRLGQSLTMTPQLQQAIRLLQLSTLELQQEIQQALDNNPLLEQEENEAQETSEA
EAQDASQLDSSDAMAQESMPDELPVDTTWDEVYSAGTAQSAGPIHDGEDSIYQGETTENL
QDYLLWQMRLTPFSDVDAAIALAIIDAIDESGYLTATLEDIQAAVSSEEVEVELDEVEAV
LKRVQHFDPVGIAARSVQECLLIQLGQYSPELPWLNEAREVIREHMDLLGNRDYRTLARK
TRLKESDLKEVLDLIQQLEPRPGNGIIQSESQYVIPDVSVVKKGSKWVVELNPDSAPRIR
VNEAYAAMARNARSSTDTQFIRSHLQEAKWFIKSLESRNDTLLKVASCIVEQQQGFFEYG
EEAMKPMVLNDIAEAVEMHESTISRVTTQKYMHTPRGIFELKFFFSSHVNTEGGGECSST
AIRALIKKLVTAENPAKPLSDSKIADLLAEQGIMVARRTIAKYRESLLIPPSNQRKRLV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgacattacagttgcgcctcggtcagtccctgaccatgacgccacaattacaa
caagcgattcgtctgctccagctctccaccctggaactccagcaggaaattcagcaagcg
ctcgacaacaaccccttgctggagcaagaggagaacgaggcgcaggaaaccagtgaggca
gaggcacaggacgccagtcaactcgactccagcgatgccatggcccaggagagcatgccg
gacgaactgccggtggacaccacctgggacgaggtctactccgccggtacggcccagagt
gcagggcccattcacgacggggaggacagcatctatcagggggaaaccaccgagaacctg
caggactacctgctgtggcagatgcggctcacccccttcagcgacgtggatgcggcgatc
gcgctggccatcatagatgccatcgacgaatccggctatctgacggccaccctcgaagat
attcaggctgcagtcagcagcgaagaggtagaagtcgaactggatgaggtcgaagcggtg
ctcaagcgggtgcagcatttcgatccggtcggcatcgccgcccgctcggtacaggagtgc
ctgcttatccagctcggccagtattcgcctgaattgccctggctcaacgaggccagggag
gtgatccgcgagcacatggatctgctcggcaatcgcgactatcgcaccctggctcgcaag
acccgcctcaaggagagcgatctcaaggaggtgctggatctcatccagcaactggaaccc
aggcccggcaacggcatcatccagagtgaatcccagtacgtgatcccggatgtgtccgtg
gtcaagaaggggagcaagtgggtggtggagctcaatccggactcggcaccgcgcatccgt
gtcaacgaggcctatgcggccatggcgcgcaatgcccgcagcagtacggatacccagttc
atccgttcccatttgcaggaggccaagtggttcatcaagagtctggagagccgcaacgac
accctgctcaaggtggccagctgtatcgtcgagcagcagcagggcttcttcgagtatggc
gaagaggcgatgaaacccatggtgctcaatgacatcgccgaggccgtggagatgcatgag
tcgaccatttccagggtcacgacccagaagtacatgcatacgccccgcggcatcttcgaa
ctgaagttttttttctccagtcatgtcaatacggagggaggaggagagtgctcatcgacc
gctattcgtgcgctcatcaagaagctggtgacggcggagaaccccgccaagccgcttagt
gatagcaagatcgcggatttgctggccgaacagggtattatggtggcgagacgcacgatc
gcaaagtaccgtgaatccttgttgatcccgccatccaatcagcgcaaacgcctggtttag
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