Aeromonas sanarellii: KXJ75_22740
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Entry
KXJ75_22740 CDS
T08465
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
asaa
Aeromonas sanarellii
Pathway
asaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KXJ75_22740 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asaa03021
]
KXJ75_22740 (rpoC)
03400 DNA repair and recombination proteins [BR:
asaa03400
]
KXJ75_22740 (rpoC)
Enzymes [BR:
asaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KXJ75_22740 (rpoC)
Transcription machinery [BR:
asaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KXJ75_22740 (rpoC)
DNA repair and recombination proteins [BR:
asaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KXJ75_22740 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QXW29335
LinkDB
All DBs
Position
complement(4770052..4774356)
Genome browser
AA seq
1434 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDSIKIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVIEPGMTNLERSQMLSEENYLDALEEWGDEFDAKM
GAEAILALLRAIDLEGEVKAMREELDQTNSETKRKKTTKRLKLMEAFLQSGNKPEWMIMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIYGKLESRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPASGEPIIVPSQDVVLGLYYMTRARINAKGEGMVLSGPKEAEKVYRAG
LADLHARVKCRITEYVKNEAGELVAKTEMKNTTVGRAILSLILPKGMEYALIDEPKVLTA
AEQADLDANPQNWIKCVSNKALGKKLISRLLNTCYRKQGLKDTVIFADQLMYTGFHYAAL
SGASVGIDDMVIPDAKKDIIAAAEAEVAEIQDQFLSGLVTAGERYNKVIDIWASANDRVS
KAMMDNLSKERNVNSLGDEEEQASFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSI
IETPIVANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDMVITEDDC
GTTDGLWMTPLIEGGDVVEPLRERVLGRVVAEDVIKPGTEDEVLVARNTLLDEQLCDLLE
RNSVDRVKVRSAITCETDFGNCAHCYGRDLARGHLVNKGEAVGVIAAQSIGEPGTQLTMR
TFHIGGAASRAAAESSVQVKNTGSIKLQNAKFVLNNSDKLVITSRSTELTIMDEMGRTKE
SHKLPYGSVLEVKDGQAVSAGDTVANWDPHTHPIITEVAGRLHFEHMIDGVTITRQTDEL
TGLSSIVVLDVNERPSAGKEMRPTVKLVDLNGKDVMIPGTDVPAQYFLPGKAIVNLEDGA
NVGVGDAVARIPQESSGTKDITGGLPRVADLFEARQPKEPAILAEISGTISFGKETKGKR
RLVITPTDGGEIYEEMIPKWRHLNVFEGEKVEKGEVLADGPESAHDILRLRGISPVANYI
ANEVQDVYRLQGVKINDKHIEVIVRQMLRKCEILSAGDTDLIEGEQVEVARVKIANRKLV
AEGKTPATYRHILMGITKASLSTESFISAASFQETTRVLTEAAVGGKRDELRGLKENVIV
GRLIPAGTGFAYHHSRINQRAAAARAVGVPQVTADEAQQNLADLLNAAGSFDEE
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttactcaagtttttgaaggctcagaccaagaccgaagagtttgacagtatc
aagatcggtctggcctctcctgacatgatccgctcctggtcattcggtgaggtcaaaaag
cctgagaccatcaactaccggactttcaagccggagcgtgatggtctgttctgcgcccgt
atcttcggaccggtgaaggactacgagtgtctgtgcggcaagtacaagcgcctgaaacac
cgtggtgtgatctgcgagaagtgcggtgtagaagtgacccagaccaaggtccgtcgtgag
cgcatgggccacatcgagctggccagcccgactgcccacatctggttcctgaagtccctg
ccgtcccgtatcggtctgctgctggacatgaccctgcgtgacatcgagcgcgtgctgtat
ttcgaatcctatgtagtgatcgaacccggcatgaccaacctcgagcgcagccagatgctg
tccgaagagaactatctggacgcactggaagagtggggcgacgaattcgacgccaagatg
ggtgccgaggccattctggccctactgcgcgccatcgatctggaaggcgaagtcaaagcc
atgcgtgaggagctggatcagaccaactccgagaccaagcgcaagaagaccaccaagcgt
ctgaagctgatggaagccttcctgcaatccggcaacaagccggagtggatgatcatgaca
gtgctgcccgtgctgccgccggacctgcgtccgctggtaccgctggacggcggccgtttc
gcgacctccgatctgaacgatctgtaccgtcgcgtgatcaaccgtaacaaccgtctgaag
cgtctgctggatctggctgcgccggacatcatcgtgcgcaacgaaaagcgcatgctgcaa
gagtccgtggatgccctgctggacaacggccgtcgtggtcgtgccatcaccggctccaac
aagcgcccgctgaaatccctggccgacatgatcaagggtaagcaaggtcgtttccgtcag
aacctgctgggtaagcgtgtcgactactccggtcgttccgttatcaccgtaggtccgact
ctgcgtctgcatcagtgcggtctgccgaagaagatggctctggagctgttcaagcccttc
atctatggcaagctggaatcccgcggtctggcgaccaccatcaaggccgccaagaagatg
gtggagcgcgaagaagccgtcgtttgggacatcctggacgaagtgatccgcgaacacccg
gtcctgctgaaccgtgcaccgaccctgcaccgtctgggtatccaggcgtttgaaccgacc
ctgatcgaaggcaaggccatccagctgcacccactcgtctgtgccgcctataacgcggac
ttcgacggtgaccagatggcggtccacgtaccgctgaccctggaagcccagctggaagcg
cgcgccctgatgatgtccaccaacaacatcttgtcgcccgcctccggtgagccgatcatc
gttccttcccaggacgtggtcttgggtctgtactacatgacccgtgcccgtatcaacgcc
aagggcgaaggcatggtgctgtccggtccgaaagaggccgagaaggtctaccgtgccggt
ctggccgacctgcacgcacgcgtcaagtgccgcatcaccgagtacgtgaagaacgaagcc
ggtgagctggttgccaagaccgagatgaagaacactaccgttggtcgtgcgatcctgagc
ctgatcctgcccaaaggcatggaatacgccctgatcgacgagcccaaggtactgactgct
gcagagcaggctgacctggacgccaacccgcagaactggatcaagtgcgtctccaacaag
gcgctgggcaagaagctcatctcccgtctgctgaacacctgctatcgcaagcagggcctg
aaggacaccgtcatcttcgctgaccagctgatgtacaccggtttccactacgcggccctg
tccggtgcgtccgttggtatcgatgacatggtcatcccggatgccaagaaagacatcatc
gccgccgctgaagccgaagtcgccgagatccaggaccagttcctgtccggtctggtgacc
gcgggcgaacgctacaacaaggttatcgatatctgggccagcgcgaacgatcgcgtctcc
aaggccatgatggacaacctttccaaggagcgtaacgtcaactccctgggcgatgaggaa
gagcaggcatcgttcaacagcatcttcatgatggccgactccggggcgcggggttccgcc
gcccagatccgtcagctggccggtatgcgtggcctgatggcgaagccggatggttccatc
atcgaaacgccgatcgtggcgaacttccgtgaaggtctgaacgtactgcagtacttcatc
tccactcacggtgctcgtaagggtctggcggataccgcactgaagactgcgaactccggt
tacctgacccgtcgtctggttgacgtggcccaggacatggtgatcaccgaggacgattgc
ggcactaccgacggtctgtggatgactccgctgatcgagggtggcgacgtggtcgagccg
ctgcgtgagcgcgtgctgggtcgtgtggtggccgaggacgtcatcaagccgggtaccgag
gatgaagtgctggtagcgcgcaacaccctgctcgacgagcagctgtgtgacctgctggag
cgcaactccgtcgaccgcgtgaaggtacgttccgccatcacctgtgagaccgacttcggt
aactgtgctcactgctacggccgtgatctggcccgtggtcacctggtgaacaagggtgag
gctgtcggtgttatcgccgcccagtccatcggtgagccgggtacccagctgacgatgcgt
accttccacatcggtggtgccgcatcccgagcggctgccgagagcagcgtccaggtgaag
aacaccggtagcatcaagctgcagaacgccaagttcgttctgaacaactctgacaagctg
gttatcacctcccgttctaccgagctgaccatcatggatgagatgggccgtaccaaggaa
agccacaagctgccttacggttctgtcctggaagtgaaggatggccaggccgtgagcgcc
ggtgataccgtcgcgaactgggacccgcacacccacccgatcatcaccgaagtggcgggt
cgtctgcacttcgaacacatgatcgatggcgtgaccatcactcgtcagaccgacgagctg
accggtctctcctccatcgtcgtgctggacgtcaacgagcgtccgagcgccggtaaagag
atgcgtccgaccgtgaaactggtcgacctgaacggcaaggatgtgatgatcccgggcacc
gacgttcccgcccagtacttcctgccgggcaaggcgatcgtgaacctggaagatggcgcc
aacgtgggcgtgggtgacgctgttgcgcgtatcccgcaagagtccagtggtaccaaggac
atcaccggtggtctgccgcgcgtcgcggatctgttcgaagcacgtcagccgaaagagccg
gccatcctggccgaaatctccggcaccatctccttcgggaaagagaccaagggcaagcgc
cgcctggtcatcaccccgaccgacggtggcgagatctacgaagagatgattccgaagtgg
cgtcacctcaacgtgttcgaaggtgaaaaagttgagaagggtgaagtcctggcggacggt
cctgagtctgctcacgacatcctgcgtctgcgcggtatcagcccggtcgccaactacatc
gccaacgaagtgcaggacgtttaccgtctgcagggcgttaagatcaacgacaagcacatc
gaagtcatcgtgcgtcagatgctgcgcaagtgcgagatcctgagcgccggcgataccgac
ctgatcgaaggcgagcaggttgaagtggctcgcgtgaagattgccaaccgtaaactggtt
gccgaaggcaagaccccggctacctaccgtcacatcctgatgggtattaccaaggcatct
ctgagcaccgagtccttcatctccgcggcttccttccaggaaaccacccgggttctgacc
gaagcggccgttggcggcaagcgcgacgaactgcgtggcctgaaagagaacgtgatcgtg
ggtcgtctgatcccggcgggtaccggctttgcctaccaccacagccggatcaaccagcgt
gccgccgcagcccgtgctgtcggtgtaccgcaggtgactgccgatgaggctcagcaaaat
ctggcggatctgctcaacgcagccggcagctttgacgaagagtaa
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