Athalassotoga saccharophila: ATHSA_0387
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Entry
ATHSA_0387 CDS
T06407
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
asac
Athalassotoga saccharophila
Brite
KEGG Orthology (KO) [BR:
asac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asac03009
]
ATHSA_0387
Enzymes [BR:
asac01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ATHSA_0387
Ribosome biogenesis [BR:
asac03009
]
Prokaryotic type
ribosomal protein modification factors
ATHSA_0387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BBJ27518
LinkDB
All DBs
Position
complement(390408..391691)
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AA seq
427 aa
AA seq
DB search
MRIWIDVLGCPKNEADSDALKAILVKRGHEIVKDLDDADVAIINTCAFVSDAKRESVDEI
LEVVNYKDQRDIKVIVHGCLTQRYFKEIRKEIGEIDAVLGVVPPLKVAQAVENLEDFKDS
PQPIYEFLGRTIDEKPYAYVKIGDGCDRKCAFCAIPSIKGPLKNRGYDDILEEIRFLVQN
GKKEIILVSQDSTSYAYNGKNFMDLLRSIDSIEGEFWIRLLYLYPDGIDEDLVMTVANSK
KILHYFDMPLQHASPKILRLMRRNPDLESIKRKISFIRSEIPDAIFRTSFIVGFPQEEES
DFEDLLRFIDEMKFDRVGAFIYSDEEGTESYNLDQKVKRSVARLRFNKLLERQQRISLER
NKKLVGMNFKTLVEGFENGMYFGRTYMDAPEIDGLVYISSSKPVKIGTFVDVKIKSFEFY
DLEGELK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagaatatggatagatgtcttaggatgtcctaaaaatgaggccgattcggacgcactt
aaggccatacttgtgaaaagaggtcatgagatagtaaaggatttagacgatgcagatgtt
gcgataataaacacgtgtgcttttgtatcggatgcaaaaagggaatctgtagatgagata
ttggaagttgtcaattacaaagatcaaagggatatcaaagtaatagtccatggatgtcta
acgcagcgctactttaaagaaataagaaaggaaataggcgagatcgatgccgttctcggt
gttgttccaccgttgaaggttgcacaagccgtagagaatcttgaagattttaaagattct
cctcaacctatttacgaattccttggaaggactatcgatgaaaagccatacgcttacgta
aagataggcgatggttgcgatagaaaatgtgcgttttgtgccatcccgtcgataaaaggt
ccactaaaaaacagagggtatgatgatattcttgaagagataagatttcttgtccaaaat
ggaaagaaagagataattcttgtctcccaagattctacgagttatgcctataatggtaaa
aatttcatggatcttttaagatctatagatagtatagagggagaattctggataagactt
ttgtatctttatccagacggcatcgatgaggatctcgttatgaccgttgcaaactccaaa
aagatactccattactttgatatgccccttcaacatgcatcacctaagattttaaggttg
atgagaagaaatccggacctcgaatcaatcaagcgcaagatctctttcataagatctgaa
ataccggatgccatttttagaacatctttcatagttggctttcctcaggaagaggagagt
gactttgaagatttactccgattcatcgatgagatgaagttcgacagagttggtgccttt
atttactctgacgaagagggcaccgaatcttacaacttagatcaaaaggtcaaaaggagc
gttgcaaggttaagatttaacaaacttttagaaaggcaacaaaggataagtttggaaaga
aataaaaaattggtcggaatgaattttaagacacttgttgaaggctttgaaaacggaatg
tatttcggccgaacctatatggatgcaccagaaatagatggcttggtctacatttcctct
tcgaagcctgttaagatcggaacttttgtggatgtaaagattaaatccttcgaattttac
gatttagaaggagaactgaaatga
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