Athalassotoga saccharophila: ATHSA_0527
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Entry
ATHSA_0527 CDS
T06407
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
asac
Athalassotoga saccharophila
Pathway
asac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATHSA_0527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asac03019
]
ATHSA_0527
03110 Chaperones and folding catalysts [BR:
asac03110
]
ATHSA_0527
03029 Mitochondrial biogenesis [BR:
asac03029
]
ATHSA_0527
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asac04147
]
ATHSA_0527
Enzymes [BR:
asac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ATHSA_0527
Messenger RNA biogenesis [BR:
asac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ATHSA_0527
Chaperones and folding catalysts [BR:
asac03110
]
Heat shock proteins
HSP60 / Chaperonin
ATHSA_0527
Mitochondrial biogenesis [BR:
asac03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ATHSA_0527
Exosome [BR:
asac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ATHSA_0527
Exosomal proteins of other body fluids (saliva and urine)
ATHSA_0527
Exosomal proteins of breast cancer cells
ATHSA_0527
Exosomal proteins of colorectal cancer cells
ATHSA_0527
Exosomal proteins of bladder cancer cells
ATHSA_0527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2275
GTP-bdg_M
Motif
Other DBs
NCBI-ProteinID:
BBJ27650
LinkDB
All DBs
Position
516969..518585
Genome browser
AA seq
538 aa
AA seq
DB search
MPKLLKFDQDARQSILTGVQKLASAVKITLGPKGRNVVIEKSFGSPTVSSDGVSIAKEID
LEDKFENLGAQLVKEVATKTNDAAGDGTTTATVLAEAMIKEGIKNITAGTNPMIMRVGMQ
EATEKAVEEIKKLSKKLNGRTDIAHVAAISANNEEIGELIAEAMDKVGQDGVITVEDSKT
METHVEFTEGMQFDRGYISPYFVTDAEKMEANLSDAFILITDKKISAVKPMIPILEKIAQ
TGKPLLIIAEDVEGEALTTLVLNKLKGTLNVVAVKAPGFGDRRKAMLQDIAILTGGTVIS
EEIGLDFDNVTLDMLGRAKSIKVRKDDTLIVDGAGKEKDIKDRIAQIKAQIEITTSEYEK
ETLQERMAKLSGGVAVIKVGAATETELKEKKQRIEDALSATKSAVEEGIVAGGGVTLLRV
SEELKKFEEKLEGEKKIGAMIVRKALSEPIKIICQNAGVDGAVVVNQVLSNPSKSYGYDA
LKGKYVDMFEAGIIDPAKVTRSALQNASSISSMLLTTEVAIVEKPEEKKEMPPMPPEY
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagttactcaaattcgatcaagacgcaagacaatctatacttacaggtgtccaa
aaacttgcgagtgccgttaaaataactcttggtcctaagggaagaaatgttgttattgaa
aaaagttttggttctccaacggtttcaagtgatggagtttctattgccaaggagatagat
ctcgaagataaatttgaaaatctcggtgcccaacttgtaaaagaggttgcaacgaagacc
aacgatgccgccggtgatggaacaacaactgcgaccgttttggccgaggcaatgataaag
gaaggtataaagaacataactgcgggcaccaatccaatgataatgagggttggtatgcag
gaagcaaccgagaaagcggttgaggagataaagaaacttagcaaaaagttaaatggcaga
acggatatcgctcacgttgcggcgataagtgccaacaacgaagagatcggagaactcata
gccgaggcaatggacaaggttggtcaggatggagtcataaccgttgaagattctaaaact
atggaaacgcacgtcgagttcaccgaaggtatgcaattcgatcgtggatacatctctcca
tactttgtaacagatgctgaaaagatggaagccaacctttcagatgcgtttattttgata
accgacaaaaaaataagcgctgtaaagccaatgataccgattctcgaaaagattgcccag
acaggtaaaccactgctcataatagccgaagacgttgaaggtgaggcccttaccacatta
gtgcttaacaaattgaagggtacactcaacgttgtggccgtcaaggctcccggatttgga
gacagaagaaaggcaatgttacaggatatcgccatattgacgggcggtacagttataagt
gaggaaataggccttgactttgacaacgtaactctcgatatgcttggccgtgcaaagagc
ataaaggtaagaaaagatgacactctcatcgttgatggagccggaaaagaaaaggatata
aaggatagaatagcccagataaaggcccagatcgagatcacaacgagcgaatacgaaaaa
gaaacgttacaggaaagaatggcaaaattgtctggcggggtcgccgtcataaaagttggt
gccgctacagaaacggaactcaaagagaaaaagcaaagaatcgaagacgctctaagcgct
acgaaatctgccgttgaggaaggtatagtcgctggtggtggagtaacgcttttgagagtt
tctgaggaactcaaaaagttcgaagagaaactcgagggtgaaaagaagatcggtgccatg
atagtcagaaaagcgcttagcgagcctataaagataatttgccagaacgcgggtgtcgat
ggggccgttgttgtaaatcaggtactttccaatccaagcaaatcttatggatacgatgca
cttaaagggaaatacgttgatatgttcgaggccggtataatagacccggcaaaggttaca
agaagcgcccttcagaatgcgtcttctatctcttccatgctgcttacaactgaagttgcc
atagttgaaaagccggaagagaaaaaagaaatgcctcctatgcctcctgaatattga
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