KEGG   Athalassotoga saccharophila: ATHSA_0629
Entry
ATHSA_0629        CDS       T06407                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
asac  Athalassotoga saccharophila
Brite
KEGG Orthology (KO) [BR:asac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asac03032]
    ATHSA_0629
   03036 Chromosome and associated proteins [BR:asac03036]
    ATHSA_0629
   03400 DNA repair and recombination proteins [BR:asac03400]
    ATHSA_0629
DNA replication proteins [BR:asac03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ATHSA_0629
Chromosome and associated proteins [BR:asac03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    ATHSA_0629
DNA repair and recombination proteins [BR:asac03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      ATHSA_0629
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 DUF2267 DUF4777 HU-CCDC81_euk_1 HU-CCDC81_bac_2 HU-DNA_bdg DUF937 Herpes_UL6
Other DBs
NCBI-ProteinID: BBJ27739
LinkDB
Position
617082..617354
AA seq 90 aa
MNKKELIDKVAEETGYHKKEIKDVVEGVLTSITKALADGEKVQLVGFGTFEVVKRSAREG
RNPQTGKKIKIAERKVPKFRPGKAFKEEVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagaaggaactgatcgataaggtagcggaagagacgggatatcacaagaaagag
atcaaagacgtagtcgagggagttcttaccagcataacaaaggcgcttgccgatggtgaa
aaagttcaactcgtgggattcggaacatttgaggttgtcaagagatctgctcgcgaggga
agaaatccacagactggtaagaagataaagatagcagaaagaaaagttccgaaattccgc
cctggaaaagcgtttaaggaagaagtgaaatga

DBGET integrated database retrieval system