Athalassotoga saccharophila: ATHSA_0684
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Entry
ATHSA_0684 CDS
T06407
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asac
Athalassotoga saccharophila
Pathway
asac03420
Nucleotide excision repair
asac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATHSA_0684
03430 Mismatch repair
ATHSA_0684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asac03400
]
ATHSA_0684
Enzymes [BR:
asac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATHSA_0684
DNA repair and recombination proteins [BR:
asac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATHSA_0684
MMR (mismatch excision repair)
Other MMR factors
ATHSA_0684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
DEAD
AAA_11
AAA_30
ResIII
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
BBJ27793
LinkDB
All DBs
Position
666834..668768
Genome browser
AA seq
644 aa
AA seq
DB search
MKKADLNYKIHSQDSSIDCLESLDEEQRAAVLDDGGNSIVIAGPGSGKTKVITHKIAYLI
SKGVPAGKILLVTFTKAAANEMIHRAQQVSRSPLNGMLAGTFHHVCNYLLRKYSNVLKLD
PNFSILDEEDSKTIVKQAIGEYVEKNEKFPSPSVVLSVISLAANTSREIEDVVEEDFDYL
YSFSSKLKSIKERYEKLKIDQSALDYDDLLVYTNNLLDIESVREKESLNYLWVLVDEFQD
TNKIQYEIVKKLSSVHGNLMVVGDDAQSIYSFRGARYENIIEMANKKDVKIYKIQTNYRS
SPQIVELINSMIPNNIFAKSLKPVKPDFKRPVVVSTWDSIEEAEFVSTKINELVNEGISP
SEIAVLYRNHSQSMDLQLELSKSRIPFKVRSGVRFTDSKHVKDVLAFLRVLANPKDMISW
MRIFQLFSGIGKRSTEKVISDEDFRNDPIDFARHLSKIGQKYEKIEEIFRTISKDDTPSE
ILDRIFEDFYSDYITLNFEDRVERQMDIKRVIEIAERYENINDFLSDLAITENIDLDRRE
GEKEESVTLTTVHRAKGLEWDVVFIISVNPGDFPSSFAISEGKIEEEERVFYVAITRAKR
YLFISRQMTGSRIPYYGNRIEINGNKYDFVERIPPSLYEHWRVN
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagccgatcttaactacaaaattcactctcaagattcttctatcgattgtttg
gaaagccttgatgaggagcaaagggccgccgtccttgatgatggtgggaattccattgtc
atagcgggtccgggatctgggaagaccaaagtcataacccacaagatcgcctatcttatt
tcaaagggagtgcctgcgggaaagatcctgcttgtaacctttacaaaagcggccgcaaat
gaaatgattcacagggcccagcaggtctcaaggagccctctaaatggcatgctggcaggt
acctttcaccatgtgtgcaattaccttctgagaaaatattcgaatgtgttgaaattagat
ccgaatttttctatactcgacgaagaggattcaaagactattgtaaaacaggccattggt
gaatacgttgaaaaaaatgaaaaatttccatctccttcggttgttttaagtgtgatttct
cttgccgccaatacttcgagagagatagaggacgtcgttgaagaagactttgattatctt
tactccttttcgagtaaattgaaaagcataaaagaaagatatgaaaaactgaagatcgat
cagtcggcgctcgattacgatgatttgctcgtttacacgaacaatttgcttgatatagag
tccgtacgtgagaaagagagtctcaattacctttgggttcttgtcgatgaatttcaggac
acgaacaagatccagtacgaaatagttaaaaaactctcttcggttcatggcaatcttatg
gtcgtcggagatgacgcgcagagtatctattctttcaggggtgcaaggtacgagaatata
atcgagatggcgaataaaaaggatgtcaaaatatacaaaatccagacgaattacagaagt
tctccgcaaatagttgaacttataaattcgatgatccccaacaacatattcgcaaagagt
ctaaagcctgtaaagcccgattttaaaagacctgttgttgtcagtacgtgggactccatc
gaagaagccgagtttgtcagtacgaagataaatgaactcgtaaatgaagggatatctccg
tcagaaatagcggttctctacagaaatcacagtcagtctatggatcttcaactcgaactt
tcgaaatcgagaattccttttaaggtgagatcgggcgtcagatttacagattcaaaacac
gtaaaggatgttttggcttttttaagggtgcttgccaatccaaaggacatgatctcgtgg
atgaggatctttcagttgttctcgggtataggaaaaagaagcacggaaaaggttatatcg
gatgaagatttcagaaatgatcccatcgatttcgcccgacacctttcgaagatcggacag
aagtatgagaaaatagaggagatattcagaacgatctccaaagatgatactccatctgaa
attcttgatcgtatctttgaagacttttattccgattacataacgctcaatttcgaagac
agagttgaaaggcagatggatataaagagggttatagagatagccgaaaggtacgaaaat
ataaatgattttctctcagaccttgccataaccgagaatatcgatcttgacaggagagaa
ggtgaaaaagaggagagtgttactttaaccaccgttcacagggcaaagggtcttgagtgg
gatgttgtgttcataatctctgtgaatcccggtgatttcccatcttcctttgccatatcc
gaggggaagatagaagaagaggagcgtgttttttacgttgcgataacgagggccaaaagg
tacctctttatctcaaggcaaatgacaggttcaagaatcccatattatggaaacagaata
gaaataaatggaaacaagtacgattttgttgaaagaataccgccttctttgtacgaacat
tggagagtaaactga
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