Athalassotoga saccharophila: ATHSA_0725
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Entry
ATHSA_0725 CDS
T06407
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
asac
Athalassotoga saccharophila
Pathway
asac03410
Base excision repair
asac03430
Mismatch repair
asac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATHSA_0725
03430 Mismatch repair
ATHSA_0725
03440 Homologous recombination
ATHSA_0725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asac03400
]
ATHSA_0725
DNA repair and recombination proteins [BR:
asac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ATHSA_0725
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ATHSA_0725
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ATHSA_0725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BBJ27833
LinkDB
All DBs
Position
713483..716407
Genome browser
AA seq
974 aa
AA seq
DB search
MKSEWRIVDSDKDLEQILSKKFDVSAFLARLLSKRVKNIQEAEELLFPDRIKLGNPYDMF
GMYDVVKELIKIRERKEPLVIYGDYDVDGVTGTALYYLLLKKWGWNVEYHIPSRLEEGYG
LSKESIKKFSDEGKKNFLTVDCGITSIDEVRYANDLGCKIIITDHHEPKDTLPEATAIVN
PKCPQDTYPFKSFSGVGVAYKVVEALKEYLQTGDDLENYLDIVALGTIADIVPLMGENRY
FVHKGIQLLSLKNRVGLSALMEASNVDFENIKTHDVGFRIAPKINAVGRIDNAVTALQLI
IEEDSKEAAKLADELVRKNQERQFIENQIYQEAMASLDNLEIDKLKALVIDHKNWHPGVI
GIVASRILSIYHKPTFMISVDGDMARGSARSVDNVNIIDVLSRAKDLLEEFGGHKMAAGF
SLRAEMIGAFKERINEIMADYDSELLKSELLIDDEISLEDINEEFVNGIERLKPFGNGNT
EPVFLIRDLRIEQLKPVGKNSFKVLLRSKESRMEGVGFGLLELTNTFRFSPGYKTADVVA
NVWINSWNDTKRYQLNIIDLDVKDNVVHRDHHFDELEIEGMINQNSFVIGSADVIEKMIV
QMSKKVKNIVVVLPTNSMLADLFSSVKHSLSNFRLGYVDALHQPFEEMDIVFTNALSLGR
IKNSSNLVICEPQMMIHSFAFDEMLYNIERLNPKTLLFFSSFVNRDEEDKIIREFNCKVI
KIFQKQNVGIIDDRNVKDKTEMIIDLIESRMKTAVIFSNIQSLKSFYSKLCKIYPEMCSN
QEITVYNDVKNAFLKYSKVNLLLVNGMNIPKMEFDRIVYYDFPRNHMEFLKPPAILKDRS
ITLHMAFGYEDFEQNLRDLDEIFPSPYKVIEGAKNIYKFEDEDPIDVLVRSEIASSRSIA
KIYLSILSEISAFDGKRITRIPSLNEIERSSREREGKMERLNLRFLERDLMNSHVKSIAR
IFQNPFEIHEKSGN
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaagtgaatggaggatagtagattctgataaagatttagagcagatcttaagcaaa
aaattcgatgtaagtgcttttcttgcaagattgctttcaaaaagggtaaaaaatatccag
gaggctgaagagttactctttccagatcgaataaaacttggcaatccttacgacatgttc
ggaatgtacgatgttgtaaaagaattgatcaagatcagagaaaggaaagaacctcttgtt
atatacggtgattacgatgtcgacggtgttaccggtacggcattgtactatttacttttg
aaaaagtggggatggaatgttgagtaccacattccaagcaggcttgaagaagggtatggt
cttagcaaggaaagcataaagaaattttcagatgagggaaagaaaaattttttaacggtc
gattgtggaataacctctatagatgaggtaaggtatgcaaatgatctgggatgcaagatc
ataataacggatcatcatgagcccaaggacacgcttccggaggccactgccatagtgaac
ccaaaatgccctcaggacacttatccttttaaatccttttccggtgtaggcgttgcctac
aaggtagtcgaggctttaaaagagtaccttcagaccggcgatgatctcgaaaattatctt
gatatagtagcccttggaacgatagcggatattgtccctttgatgggagaaaatagatat
tttgtccacaaaggtattcaactgctttctttgaaaaacagggtaggactttctgcacta
atggaggcatcgaatgtagattttgaaaatataaaaacccacgacgtgggttttagaata
gcgccaaagataaacgcagtcggaagaatagacaatgcagttacagcccttcagttgata
atcgaagaagattcgaaagaggccgcaaaacttgccgatgaacttgtacggaagaatcaa
gaaagacaattcatagaaaatcagatatatcaagaggctatggcaagcctcgacaatctc
gaaatcgacaaattaaaggctcttgtcatagatcacaaaaactggcatccgggcgttata
ggtatagttgcatcgagaatactttcaatataccacaagccaacctttatgataagtgta
gatggagatatggcaagaggatctgcgcgaagcgtcgataacgtcaacataatagatgtg
ctaagtagggcaaaggatctccttgaggaatttggcggtcacaaaatggcggccggattt
tctcttagggccgaaatgataggcgcttttaaagagagaataaatgagattatggccgat
tacgattccgaattgttaaagagtgaattacttatagacgatgagatctctttggaggat
ataaatgaagaatttgtaaatggcatagaaaggctaaaaccatttggaaatggaaatacc
gaaccggtctttctcataagagatcttagaatagagcagttaaagccagttggaaagaac
agttttaaggtattgcttagatccaaagaaagcagaatggaaggcgtaggatttggcctt
ttggaactgacgaatacttttagattttctcccgggtacaaaacggccgatgtcgttgcc
aatgtgtggataaactcatggaatgacacaaaaagatatcagttgaacataatagattta
gacgtaaaggataacgtcgttcatcgcgatcatcatttcgatgagttagagatagaaggc
atgataaatcaaaactcctttgtgatcggttctgccgacgtaatcgagaagatgatcgtc
caaatgtctaaaaaagttaaaaacattgtcgtcgttcttccgaccaattcgatgcttgcc
gacctctttagttctgttaagcattccctttcgaatttcagactcgggtacgttgatgcc
cttcaccagccatttgaagaaatggacatcgtctttacaaatgcgctatcgcttggcagg
attaaaaattcttcgaatcttgtcatctgtgagccccaaatgatgattcactcttttgcc
tttgatgaaatgttgtacaacatcgaaaggttaaatcccaaaacacttctattcttttca
tctttcgtgaatcgagatgaggaagataagataataagagagttcaattgcaaggtaata
aagatcttccaaaagcaaaatgtggggataatagacgatagaaatgtcaaagacaaaact
gaaatgataatcgatctcatagagagcagaatgaaaactgccgttattttttccaatatc
caaagtcttaagtctttttattctaaactttgcaagatttatccagaaatgtgttcaaat
caagaaataacggtctacaacgatgtaaaaaatgcttttttgaaatactcaaaggttaac
cttttgctcgtcaacggaatgaacattccaaaaatggagttcgataggatagtttattac
gattttccgagaaatcatatggaatttctcaagcctcctgcaattttaaaggatagatct
attacccttcatatggcctttggatacgaagattttgaacaaaatctcagagatctcgat
gagatctttccgtctccctacaaagttatcgaaggcgcgaagaatatatataagtttgaa
gatgaagatcccatcgatgtacttgtcagatcggagatagcatcttcaagatccatcgca
aagatatacctttcaatactttctgaaatatcggcctttgacggtaagagaataacaaga
ataccttctctaaatgaaatcgaaagaagttcaagagaaagagaaggaaagatggagaga
cttaatttgagatttctcgaaagagatcttatgaattctcatgtaaaaagtatagcaaga
atttttcagaatccttttgaaattcatgaaaaaagcggcaattga
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