Athalassotoga saccharophila: ATHSA_0874
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Entry
ATHSA_0874 CDS
T06407
Name
(GenBank) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
asac
Athalassotoga saccharophila
Pathway
asac00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
asac00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ATHSA_0874
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
asac01007
]
ATHSA_0874
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asac03016
]
ATHSA_0874
Enzymes [BR:
asac01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
ATHSA_0874
Amino acid related enzymes [BR:
asac01007
]
Aminoacyl-tRNA synthetase
Class II (U)
ATHSA_0874
Transfer RNA biogenesis [BR:
asac03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ATHSA_0874
Prokaryotic type
ATHSA_0874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
PhetRS_B1
Motif
Other DBs
NCBI-ProteinID:
BBJ27974
LinkDB
All DBs
Position
complement(846410..848755)
Genome browser
AA seq
781 aa
AA seq
DB search
MKISIEWLNDYIDTGKDIERLAEDLTLSGSEVEEIERPFERINAVFSAKVVERKAHPNAD
NLIVCRVDDGNGLHTIITSDKTVSEGDFIAFGSCQKASDVNGHVVEPLEIRGVKTDGMAF
SLQELGLEAHSEGIFKFEKPVEVGVDIKKLLDLEQTVFELEITPNRPDCLSHIGIARELS
AVRRTKFKIPKPSVDFQQGDFPVLIETDKCLRYVALTIKGVTVKDSPLWLKRRLSSVGLR
SINNVTDITNYVMMEFGHPVHAFDLEKVNSRIVVKDAKGGEKFVALNSKEYTLNGGETLI
TDGENILALGGVMGGKYSGISLQTKDILIEIATFDPVNTRKTSRKINLSTDASYRFERGV
DPNDTFDVAKRIAQMVISISGGKIDGIVDVYPTEVKSKKVFISREKLSSYMSFTPNENEV
EEIFDYLGIKVSQNGNGWECIVPTFRPDINQDVDLVEEFARIHGLDAIPSVMSMPFVKGE
SNSWWEFKNKLRTLSTSCGYFENVNYSFSDPKVEELFGDTFKRGPKLLNPVSPEMSLMRS
SLIFNLIDSLSYNVKHQENNVKFFEIGKAFEEKEEERISFAATGAVSTFDYTDKRYEDLL
IFKGEIESIFKNMHIDFEFSNEDMAGFENGRCGRILLNGKKIGIIGQISEKVNEFFDVDT
PIYVAELKIEEIFKNLRPFRYESYSQYPSSFKDLSMFVKKGEIRAAEIFKTARNSSEYVQ
DVRVVDLYTGKGVPQDSYSITIRVTYNSVKKTLSDQEIDSAFSRLMELLESMKGITLRKV
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatatcgatagaatggcttaacgattacattgataccggtaaggatatcgaacgt
cttgccgaagatttgacgctctctggtagcgaggtggaggaaatagaaaggcctttcgaa
agaataaatgccgtcttttccgcaaaggttgtcgaaagaaaagcccatccaaatgccgat
aatttgatcgtctgcagggtagatgatggaaatggattgcacacgataataacttcggat
aaaaccgtatcggaaggagattttatagcctttggaagttgccaaaaagcatctgacgta
aatggccatgttgtcgaaccgctggaaataagaggcgttaaaacagacgggatggctttt
tctttgcaagaacttggactcgaagcccattcggaaggcatcttcaaatttgaaaagcca
gtcgaagtaggagttgatatcaaaaaacttctcgatctcgaacagacggttttcgaactc
gagataaccccaaatagacctgactgtctttcccacatagggattgcgagggaactctct
gccgtaagaagaaccaaatttaaaattccgaagccttctgtagattttcaacagggcgat
tttccagtcttgatagaaacggataaatgtctgaggtatgtagccttaacgataaaggga
gttacggtaaaagattctcctttgtggcttaaaagaaggctttcatctgttggattgaga
tcgataaacaacgtaacagatataacgaattatgtaatgatggaattcggacatcccgtt
cacgcgtttgaccttgagaaagtaaattcgcgcatagtggtaaaagacgcaaagggcggc
gaaaagttcgtcgcactcaattcaaaggagtacacgctgaatggtggagagacccttata
accgatggtgaaaatatactcgcccttggcggagttatgggggggaaatactctggaatt
tctctgcagacaaaggatatcctcatcgagatcgcaacctttgatccggttaacacaaga
aaaacatcgagaaagataaacctttcaacggacgcctcatacagatttgaaagaggtgtt
gatccaaatgatacatttgatgtcgcaaagagaattgcgcagatggttatttcaataagc
ggcggaaagatagatggcatagtcgatgtatacccgaccgaagtaaagtcaaaaaaggtc
tttatctcaagagaaaaattatcatcctacatgtcctttacccccaatgaaaatgaagtg
gaagagatcttcgattatctcggaattaaagtctcccaaaatggcaatggatgggaatgc
attgtgccaacattcagaccggacataaatcaagatgtcgaccttgttgaagaattcgca
aggattcacggccttgatgccattccttctgtgatgtcaatgccatttgtaaagggtgaa
tccaattcatggtgggaattcaaaaacaaattgagaactctctctacttcatgcgggtat
tttgaaaatgtgaattattcattttcagatccaaaggttgaggaactcttcggagatacc
ttcaaaagagggcctaaacttttaaatcccgtctcgcctgagatgtctttgatgagatct
tctttgatcttcaatctcatagattctctttcttacaacgtaaagcatcaagaaaacaac
gtgaagttctttgagataggaaaagcatttgaagaaaaagaagaggagagaataagtttt
gcggcgactggcgccgtaagtacttttgattacaccgataaaagatatgaggatcttctc
atttttaaaggtgaaatagagtccatattcaaaaatatgcacatcgattttgaattttca
aatgaagatatggcgggattcgaaaatgggagatgtggaagaatacttctaaatggcaaa
aagataggcatcatcgggcagataagtgagaaggtaaatgaatttttcgatgtggacacg
ccaatttatgtggcagaattgaagattgaagagatattcaaaaatctaagacctttcagg
tacgaaagttattcacaatatccatcttcattcaaggacctttccatgttcgtcaaaaaa
ggtgagatcagagccgcagagatatttaaaacggcgcgcaattcttcagagtatgttcaa
gatgtaagggttgtagacctttacacgggcaagggtgtacctcaggactcttacagtata
actataagagttacatacaattcagtcaaaaagactctttccgatcaggaaatagacagc
gcattttcaagattaatggaattgctcgaatcaatgaagggaataaccttaaggaaggta
agataa
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