Athalassotoga saccharophila: ATHSA_1040
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Entry
ATHSA_1040 CDS
T06407
Name
(GenBank) nucleotide-binding protein YvcJ
KO
K06958
RNase adapter protein RapZ
Organism
asac
Athalassotoga saccharophila
Brite
KEGG Orthology (KO) [BR:
asac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asac03019
]
ATHSA_1040
Messenger RNA biogenesis [BR:
asac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ATHSA_1040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
DUF1512_C
SKI
AAA
AAA_23
AAA_28
AAA_16
LAMTOR
Ferritin
AAA_24
Sua5_yciO_yrdC
AAA_30
nSTAND3
AAA_29
AAA_22
RFC1
Med16_N
Motif
Other DBs
NCBI-ProteinID:
BBJ28138
LinkDB
All DBs
Position
complement(1026961..1027818)
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AA seq
285 aa
AA seq
DB search
MASEFVLISGMSGAGKTTALGALEDAGYFCMDNVPPSLIVDMLSLMESSFNGKKIAAIVD
VRAGKMLGEIKNVIENLRSRGITIKIIFLDAKDDVLINRYNLTRRRHPLAEKEDQQIEKL
LKQERELLREIREIADYVVDTSLISTHQLRSEIIALTEGKYERVLKIFLESFGFKYGLPL
GADFIFDARFLPNPYYVESLSAKTGNDPEVIEYLEKFDVVREYAEKIIEIVKMAIKNYSK
EGKSVIYVGIGCSGGRHRSVYLVNQIAKELEKEVDIRISHRDIER
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttggcatctgaattcgtcttgatctctggaatgtccggagccggcaagaccacagccctt
ggcgctttggaagatgccggatatttttgcatggacaatgttccacccagccttatagtt
gacatgctctctttgatggaatcttccttcaatggtaaaaaaatagcggcaatagtagat
gtccgagccggaaagatgcttggagagataaaaaatgtgatagaaaatctgagatcgaga
ggaataaccataaagataatttttctcgatgcgaaagatgacgtacttataaatcgttac
aatcttacaagaaggcgtcatccgctcgccgaaaaagaagatcagcaaatagaaaaactt
ctaaagcaggaaagagaactcctgcgtgagataagggaaatagccgattacgttgttgat
acctcacttataagtacgcaccagttgagaagcgagataatcgcccttaccgaaggaaag
tacgaaagagtcttgaagatctttctcgagtcttttggctttaaatacggacttccactg
ggcgctgacttcatcttcgatgcgcggtttctaccaaatccttattacgttgaatcttta
agtgcaaagaccggtaacgatccggaagttatagaatatctcgaaaaattcgatgttgta
agggagtacgcagaaaagataatcgagatagtgaagatggcgataaagaattattcaaag
gaaggaaaaagtgtaatatacgttggcattggatgtagtggcggaagacatagatctgtt
tatttagtcaatcaaatcgccaaagaacttgaaaaggaagtggatatccgtatctctcac
agagacatcgagaggtga
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