Athalassotoga saccharophila: ATHSA_1457
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Entry
ATHSA_1457 CDS
T06407
Name
(GenBank) ATP-dependent RNA helicase DbpA
Organism
asac
Athalassotoga saccharophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
PLDc_2
Cas3-like_C_2
ResIII
DEAD
Helicase_C_2
AAA_22
nSTAND3
DUF6565
Motif
Other DBs
NCBI-ProteinID:
BBJ28540
LinkDB
All DBs
Position
complement(1420238..1423546)
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AA seq
1102 aa
AA seq
DB search
MDKNKFYKENSTSFNKNFYESSIVQENKKSNLDLSFITNESGKTLKDRFNQLIRDCEFFD
CLVAYFYISGFHSIYKSLEQTKNIRILIGINTNKETYNLIRFAEDKSQDSFQFSYLETRQ
IVENLVENEMSESEDNQIVEEGVQKFIEWIKNGKLQVKAYPFHDIHAKLYIMTFREGDRD
KGRVITGSSNFTQSGLADNIEFNVELKNYADYEFAKQKFEELWKESVDVSEKFVQTINSK
TWLNQDITPYELYLKFLYEYFKEELTRNDDVFMEYLPQNFKRFKYQEQAVLNAKRILEEY
GGVFISDVVGLGKTYITAMLANQIDGRTLVIAPPAILNKSNPGSWPNVFSDFHVPAEYVS
IGNLNEAKKIVERTDFKNIIIDEAHRFRNEITISYEKISEICRGKRVILVSATPYNNSPK
DILALIKLFQNARKSTIPGVQNLETFFSRLESKLNLVDRQKDYNDLIEIEKSNSKEIRDK
ILKYLMVRRTRAEIEKYFSEDLKKNKIKFPEVKAPKPFYYQLNDEEDKIFMETVRLITKK
FKYARYTPLLYLMKNISHIEEQSQRNMGSFMKVLLVKRLESSFYAFRNSIDRFINSYKKF
IEEYDKGNVYVSKGYINKIFELLELGNDEAVQKLIDEGKAERYPSKDFKSQLKDDLENDL
KILENIKSIWQSINRDPKIETLLDNLNKDNIFKDNKIIIFTESKETAEYLTQNINNHLGK
IALLFHGDSKEEVRDQVIENFDARAKNKKDDYRILVSTEVLSEGVNLHRSNVIINYDIPW
NPTRLMQRIGRINRIDTSFDKIYTFNFFPTKQSDSEIELTRIASSKINEFLTLLGGDAFI
LTEGEPVSSHELFDKLISKEIVTEGETEESELKYLKVIENIRENDPHLFEKIKQLPRKAR
CAKMSPSSLSNITLGDFLITFFRKGRLIKFFLSDRNSTIEIDFLRVAEIIESSLNTKKEK
LPLHNYYEFLERNKNAFLVSTQENFIENSRHIRNDSATNILKILKAIQQDTKRLTEEQEE
YISKLISRIEEGSLPKQTMKKATAELNKLGSEKQNPLKVINTLQRVISKVFLESHYVETS
SIPEGKRETILSLYLINGGGKE
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggataagaacaaattttataaggaaaattcaacaagttttaacaaaaatttttatgaa
tcatcgatagttcaggaaaataagaaatcaaatttagacttatcatttataacgaacgaa
tcaggtaagacactcaaagataggtttaatcaactaataagggattgcgaattctttgat
tgtctggtcgcttatttttatataagtggatttcattcaatatataaatcactggagcaa
acaaaaaatataagaattcttattggaattaatacaaacaaagaaacttataatttaata
agatttgcagaagacaagtcacaagattcatttcaattttcttatctagaaaccaggcaa
atagtcgaaaatctcgtagaaaatgaaatgtctgaatctgaagacaatcaaattgttgaa
gaaggagtgcagaaatttattgaatggataaaaaatggtaagttgcaagtaaaagcttac
ccatttcatgatattcatgccaaattatatattatgacttttagggaaggagacagagat
aaaggaagagtcatcacgggttcaagtaattttactcaatctggtcttgccgataatatc
gaatttaatgtcgaattgaagaactatgctgattatgaatttgcaaaacaaaaatttgaa
gaattatggaaagaatctgttgatgttagtgaaaaattcgtacagacaataaattccaaa
acttggctaaatcaagatataactccttatgaactttatcttaagttcttatatgaatat
tttaaagaagaattgacaagaaatgatgatgtttttatggaatacttacctcaaaatttt
aaaagattcaagtatcaagaacaagctgttttgaatgctaaaaggatattagaagagtat
ggcggagtttttatttctgatgtagtgggacttgggaaaacttatataacagcaatgctt
gcaaatcagattgacggcagaactcttgttatagctccacccgccattcttaataaaagt
aaccctggttcttggccaaatgttttttctgattttcatgttcctgctgagtatgtttct
attggtaatcttaatgaggcaaaaaagatagtggaacgaacagattttaaaaatattatt
atagatgaagcgcatcgctttagaaacgaaataactattagttatgaaaaaatttctgaa
atttgccgtggtaaaagagtaattttagtttctgctaccccttataacaactcacccaaa
gatattcttgcactgattaaactttttcaaaacgcaaggaaaagcactattcctggggtt
caaaatcttgaaacattttttagcagacttgaatcaaaacttaacttagttgatcgacag
aaggattataatgacttgattgaaatagaaaaaagtaattcaaaagaaatccgtgataaa
attctaaaatatttaatggtcagaaggacaagagcagaaatagagaaatatttttctgag
gatctgaagaaaaataaaattaaattcccagaagtaaaagctccaaaaccattttattac
caattaaatgacgaagaagacaaaatctttatggaaacggttcggctaataactaagaaa
ttcaaatatgctcgttatacgccattactttatttgatgaaaaatatttctcatatagaa
gaacaatcacaaagaaatatgggtagttttatgaaagtactccttgtaaaacgccttgaa
agtagtttttatgcatttagaaatagcattgacagatttataaattcttataagaaattc
attgaagaatatgacaaaggaaatgtttatgtaagtaagggttatataaataagatcttt
gaacttttagaactgggaaacgatgaagcagttcaaaaacttattgatgaaggtaaagca
gaaagatatcctagtaaggatttcaaatcccagttaaaagatgatcttgagaatgatctc
aaaattttggaaaatataaaatctatatggcaatctataaaccgagatcctaaaattgag
actttattggataatctgaataaagataatatttttaaggataataaaataataatcttt
acagagtcaaaggagacagcagagtaccttactcaaaatataaataaccatttaggtaaa
attgcgctcttatttcatggagattctaaagaagaagttagagatcaagttatagaaaat
tttgatgcaagagcaaagaataagaaagatgattatagaatattggtctcaactgaggta
ctttctgagggagtcaatcttcaccgatcaaatgtaataataaactatgatataccatgg
aatcctacaagattaatgcaaagaataggaagaataaaccgtatagatacatcttttgat
aaaatatacacgttcaatttttttccgacaaaacaatcagattctgaaatagagcttaca
cgaattgcgagttcgaaaataaatgaatttttgacattacttggtggtgatgcctttata
ttaacagaaggagaacctgtatcttcacatgaattatttgataaactaatttcaaaggaa
atagttacagaaggcgaaacagaagagagcgaattgaaatatttgaaggttattgaaaat
attcgagaaaacgatccacatttatttgaaaaaataaagcaacttcccagaaaagcccgt
tgtgcaaaaatgtctccttcatctttaagcaatattactttaggtgattttttaattact
ttctttagaaaagggagattaattaaatttttcctctcggatagaaacagtacgattgag
atcgattttttgagggttgcagaaattattgaaagctctctaaatacaaaaaaagaaaaa
ttaccccttcataattattacgaatttcttgaaaggaataaaaacgctttccttgtttca
acacaggaaaattttattgaaaattctagacatattagaaatgatagtgcaactaatatt
ttaaaaattttgaaagcaatccagcaagatactaagcgattaacagaagaacaagaagaa
tatattagtaaacttataagtcggatcgaggaaggatcattacccaagcaaacaatgaaa
aaagcaactgcagagttaaacaaacttggaagtgaaaagcagaatccgttaaaagtcata
aatacgttgcaaagagtaatttcaaaggtgtttctcgaaagtcattatgttgagacgtcc
tctataccagaaggaaaaagagagaccatattatcgctatatttgattaatggtggaggc
aaagaatga
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