Athalassotoga saccharophila: ATHSA_1466
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Entry
ATHSA_1466 CDS
T06407
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
asac
Athalassotoga saccharophila
Brite
KEGG Orthology (KO) [BR:
asac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asac03016
]
ATHSA_1466
Enzymes [BR:
asac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ATHSA_1466
Transfer RNA biogenesis [BR:
asac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ATHSA_1466
Prokaryotic type
ATHSA_1466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BBJ28549
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All DBs
Position
1426299..1427216
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AA seq
305 aa
AA seq
DB search
MNGIIKVDKPQGPTSHDVVERVRKISGMRVGHAGTLDPFASGLLIVGIGEGTRILEYFLD
FPKTYEAVARLGIVTDTYDRTGKIMERSECVADEQMVRDVFLSFIGEYYQVPPMYSAKKI
SGRKLYELAREGKIITMPPSKVMIYEIKVEKVDLPYVEFKTVVSGGTYIRALCRDIGIKL
GCGAITEELRRTKVGPFDLEGSINPFDKDLINCEEIMSLEEVTKYLFKTVVINESGEKKM
RNGMPLKIEDLIAYEDFKKGEVLRVLSKEKLISLSIAQRSSNFFDTVKKHERHDLLLKPK
KVFLH
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcataatcaaagttgataaaccacaaggacccacttctcatgatgtcgttgaa
agagttagaaagatatccggtatgcgtgtgggtcatgccgggacgcttgatccatttgca
agtggtttgcttatagtcggcattggagaaggcacaagaattcttgaatattttcttgat
tttccaaaaacctatgaggcagtcgcacgtcttggaattgtaactgacacatacgataga
acgggaaagataatggaaagatctgaatgcgtagcagacgaacaaatggtgagagatgta
tttctctcttttatcggggaatattatcaggtgcctcctatgtactcggcaaagaaaata
tccggaagaaaactctacgaacttgccagagaaggaaaaataataacgatgcctccttca
aaagtaatgatatacgagataaaggttgagaaggttgatctgccatatgttgaattcaag
accgttgtctctgggggcacttatattcgtgcgctgtgcagggatataggaattaaactt
ggttgcggtgccatcacagaagaattaaggagaacaaaggtaggtccattcgatcttgaa
ggatcgataaatcctttcgataaagatctcataaattgcgaagaaataatgtctttagaa
gaggtaactaaatatttgtttaaaactgtcgttatcaacgagtccggagagaaaaagatg
aggaatgggatgcctttgaaaatagaagatttgatcgcctacgaggattttaaaaagggg
gaggtcttaagagttttaagcaaagagaaattgatatctctttcgattgcgcaaagaagt
tctaatttttttgataccgtaaaaaaacatgaaagacatgatttactcttaaagccaaag
aaggtgtttttacattga
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