KEGG   Athalassotoga saccharophila: ATHSA_p20045
Entry
ATHSA_p20045      CDS       T06407                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
asac  Athalassotoga saccharophila
Brite
KEGG Orthology (KO) [BR:asac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asac03032]
    ATHSA_p20045
   03036 Chromosome and associated proteins [BR:asac03036]
    ATHSA_p20045
   03400 DNA repair and recombination proteins [BR:asac03400]
    ATHSA_p20045
DNA replication proteins [BR:asac03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ATHSA_p20045
Chromosome and associated proteins [BR:asac03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    ATHSA_p20045
DNA repair and recombination proteins [BR:asac03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      ATHSA_p20045
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 DUF2267 HU-CCDC81_euk_1 Mnd1
Other DBs
NCBI-ProteinID: BBJ29135
UniProt: A0A6N4TF64
LinkDB
Position
pATS2:39981..40292
AA seq 103 aa
MVYSSKSLTKGEDTMNKKELVNEVSKYTGMTKKDVAEIIDAITRTIEKTVGGGEEVSLTG
FGKFLSYKRAERNGRNPRTGKTMKIKAKKVPKFRAGKDLKVNL
NT seq 312 nt   +upstreamnt  +downstreamnt
atggtatattcatctaaatcgctaaccaaaggagaggataccatgaacaaaaaggaactt
gtcaatgaagtttccaaatacaccggcatgacaaaaaaagatgtcgccgagatcatcgat
gcaataacaagaactatagagaaaactgttggcgggggagaagaggtatctctgacaggc
tttggtaagtttctatcgtataaaagggccgagaggaatggaaggaatccgaggactgga
aagacaatgaagataaaggcaaagaaggttccaaagtttagagctggaaaagatcttaag
gtcaatttgtga

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