Alosa sapidissima (American shad): 121677406
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Entry
121677406 CDS
T11137
Symbol
map1sa
Name
(RefSeq) microtubule-associated protein 1B
KO
K10429
microtubule-associated protein 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121677406 (map1sa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121677406 (map1sa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121677406 (map1sa)
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121677406 (map1sa)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
121677406 (map1sa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
121677406
NCBI-ProteinID:
XP_041912034
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All DBs
Position
12:complement(35646465..35690229)
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AA seq
1358 aa
AA seq
DB search
MATDLTDEVEAMEKTNQASHPGFSNEKYSLLVIVGEHSRAGFVDFVVAEIERGLRSWGVD
LKACNLDEQLKLFISRHSALFSDQVKGQRTLQHSGDVLDTQVVVNPSQSLVSSEVRRLIS
DESRHKLLILAGQCVERSGDLVLQTGSFSLDDFIQIFADEEIGELLSSADPTQKATLTLS
CPSTGTWKNSVLEKHNLQDFIEIKINPTATLPEMEGLQEFTEYLSESLEPQSPFELLEPP
STVGFLKLSRPCCYIFPGGRGDSAFFAVNGFNVLVNGGSDSRSCFWKLVRHLDRVDSILL
THIGVDNLPGVNSLLQRKAAELEEEQQGTGSQANEDWLKNQISPEIGVVFLNAPERLKTL
QGDPKVLRSCDQAALTLQHLQKLSITPEHLSRSSGPTIEPVILFQKMGVGRLELYVLNPV
KGSKDLEALMQSWPNNGANPKGSDLPLPCLASICALLVWHPASPHEKIIRALFPGCTPQS
KILEGFEKLKHLDFLKHPVVSLKDLETSKSDKQPKRAESKESLKSLPRDTRPASASVKDK
LARTDVKKLDPKSKTKAAGETSASKDGKDEDKAKPRDSETKLKPSKVDKPLTKKEPVKDE
KKEVRSKEAKPLTSVAKKEESMEKKKEIVKKDLSLKPKKDLKPEVKKEIKKEVKPEEKKP
AKAPAKRVSTAGASATAKTTVKNGTLKKDQGTLKKESAKGAKSKPDKKDLGNLKVPSSSE
GEADRSKMSTPEDMTEEFEKLKLENEQGSVNTTTGSEAKQSKEVNGVGAGANTGESPEKF
RCMDTLPAPSQSADPTSPLARTPKSERSVNFDLTPTEHRIGPEDGCVSSEEKTLEMVSPP
GSGQNSAGHTPFHQSPDEDAQGSGEDSSLGGKVPSLSLEDSHAPGSNKTSDAGCSRSNLE
NNSTSSQDKQSSFLSLSSFNMMADGPSFTSLPAEVGSPHSTEVDESLSVSFEQDMGDRTF
SNGHLVDPDSKAGMSLPLKACHNMRSSGDGCDERGSGPQGLFPDLPPHDVDLCLVSPCEF
QHHKSPEGLTPGHPASPHDLSDESDSQELVKPVCCNNNNNDQLTPQGANTPPTSASESLP
TGTDSDVPPATGDCPSISEDTLDSDEDDSGDIFPPQQAHDHPTPHSSHRKGPLSSPDPPP
APMKDLPPLPPQPGACMADPDADAQAKKSTAKGKKPASATQRLSTNSTAAGGKAKSGLGT
GGGTLKATSTLDTRPASRGGAGSGSRPSTAKPSSSGSAGSKASAAPVYLDLAYLPSGTAA
PSVDVELFRRLRSSCYIVSGHDPQKEAVMRSILDALLEGKTAWTDVQVTLIPTFDSLAMH
DWYQETHERQRELGITVLGSNSTVAMQDETFPACKVEF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagatctcactgatgaggtggaggcaatggaaaagacgaaccaagcttcccat
cccggatttagcaacgagaagtattctttgcttgtcatcgtcggggagcacagccgggcg
ggatttgtggatttcgtggttgcagagattgagcgaggcctgcgctcgtggggggtggac
ctgaaggcctgtaacctggacgagcagctcaagctcttcatctccagacactccgcctta
ttctccgaccaagtcaaaggacagaggactctgcagcacagtggtgacgttctggacaca
caggtggttgtgaatccgtcccaatctctggtttcatctgaggtccggaggcttatctct
gatgagtcgcgccacaagctgctgattcttgcggggcagtgtgtcgagcggtcaggtgac
ctcgtgctgcagactgggagcttttctctcgatgacttcatccagatatttgcagacgag
gagatcggtgagctgctgagctctgcagacccaacacagaaggcgacgctgactctgagc
tgtcccagtacgggcacgtggaagaactcggtgctggagaagcacaacctgcaggacttc
atcgagatcaagatcaaccccaccgccacgctgcccgagatggagggcctgcaggagttc
acggagtacctctccgagtccctggagccgcagtcacccttcgagctcctcgaaccgccg
agcaccgttggcttcctcaagctctcccgcccctgctgctatatcttcccagggggtcga
ggggactctgcctttttcgccgttaatggatttaacgtcctggtgaacggaggatccgat
tcacgctcctgcttctggaagttggtcaggcatttggaccgggtcgactccatattgctc
acacacattggcgtagacaacctgcccggtgtgaacagcctcctccagagaaaagcagct
gagcttgaggaggagcagcagggcactggctcccaggccaacgaggactggctgaaaaat
cagatttctccagaaatcggggtggttttcctgaatgccccagagagactgaaaacactc
caaggcgaccccaaagtactccgaagctgtgaccaggcagcgctcaccttacagcatctg
cagaagctgtccattactccagagcatctctcgcgctccagcggcccaacgattgaaccg
gtcatcctcttccagaagatgggagtcggccggctagagctgtacgtgttgaacccagtc
aaagggagcaaagacctggaggccctcatgcagtcctggccaaacaatggtgccaatcca
aagggctctgacctgccgttgccctgccttgcctctatctgtgcccttctggtttggcat
cctgccagcccacacgagaagatcatccgggccctcttccccggatgcacgccccagagt
aaaattctggaagggttcgaaaaactgaagcacctggacttcctcaaacaccctgttgtg
agtttgaaggacctcgagacgtccaagtcggataaacagccaaagcgtgctgaaagcaaa
gaaagcctcaagtcccttcccagggacacgagaccagcaagtgcctctgtgaaggataag
ttggcccgtactgatgtgaaaaagctggaccctaagtccaagaccaaagctgcaggcgaa
acaagtgcgtctaaggatggtaaggatgaggacaaagcaaaaccaagagacagtgagacg
aaactaaagccgtcaaaggtcgacaagcctttgacaaagaaggagcctgtgaaagatgaa
aagaaagaagtacgtagtaaggaagccaagccattgacaagtgttgccaagaaagaagag
agcatggagaaaaagaaggagatagtcaagaaggaccttagtctaaaaccaaagaaggac
ttgaaacctgaagtgaagaaagaaattaagaaagaagtcaaacctgaagaaaagaaacca
gccaaagcccctgccaaaagggtctccacagcgggggcatcagctacggctaagaccaca
gtgaagaatggcaccctgaaaaaggatcaaggtactcttaagaaggaatcagcaaaaggg
gccaagtccaagcctgacaagaaagatctgggaaatctaaaggtcccctcttcctcagag
ggggaagcagatcgctccaaaatgtccacgcccgaagacatgactgaagagtttgagaag
ttgaaattggaaaatgagcaaggctcagtaaacactacaacaggaagtgaagctaaacag
tcaaaagaagtaaatggcgttggagcaggtgctaacactggggaaagcccagagaaattc
agatgcatggatacactacccgctcccagccagtcagcggatcccacctcacctcttgca
aggacaccaaagagtgagcgcagcgtcaacttcgacctgacgccaaccgaacacagaatt
ggtccggaggacgggtgtgtgagttcagaggagaaaaccctggagatggtgtcccctcca
ggctcggggcagaacagtgctggccacacacctttccaccagtctcccgacgaggatgcc
cagggctccggtgaggacagcagtttaggcgggaaagttcccagcctcagtctggaggac
agtcacgccccagggtccaacaagacgtcagacgcaggctgctccagaagcaacctggag
aacaactccacctcctcccaggacaaacagtccagcttcctctctctcagctccttcaac
atgatggctgacggtccctccttcacgtccttgcctgccgaggttggctcgccacattct
actgaggttgacgagtccttatctgtgtccttcgagcaggacatgggggacaggacgttc
tccaacggccacctggtggatccggattccaaagcgggcatgtctctacccctaaaggcg
tgtcacaacatgcgctcgtcaggagacgggtgcgacgagagaggctctggtcctcagggg
ctcttccccgacctccctccccacgatgtggacctgtgcctggtctcgccctgcgagttc
cagcaccacaagtccccagagggcctgactccagggcaccccgccagccctcacgatctc
tcggacgagagcgactcgcaggagctggtcaagcctgtgtgctgcaacaacaacaacaac
gaccagctcacaccccagggtgcgaacacaccgccaacgtccgccagcgagtctcttcct
acgggcacggactcagacgtgcccccagccactggggactgcccctccatcagcgaagac
accttggattcggacgaggacgactccggcgacatcttcccaccccagcaagctcacgac
catcccacccctcactcctcccaccgaaagggtccgctctcgtccccggacccgcctcca
gcccccatgaaggacctgccccccctcccgccacagcctggcgcctgcatggccgaccct
gacgcagacgcccaggccaagaagagcaccgccaaaggcaagaagcctgctagcgccacc
cagaggctatccacaaacagcacggcagcagggggcaaagcgaagagtggcctgggaaca
ggagggggcacgctgaaggccacctctaccctggacaccaggcctgcttcacgtggtggc
gctgggagtggatcacggccatctactgcaaagccctcttcctcaggctctgcgggctcc
aaggcctctgcggcgccggtgtatttggacctggcctacctgccctcaggcacagcagcg
ccatctgtggacgtggagttgttccgccgcctgcgctcgtcctgctacatcgtgagtgga
cacgacccgcagaaggaggcggtcatgaggagcatcctggacgccctgctggagggcaaa
accgcatggacagatgtgcaggtgacgcttatccccacgtttgactcgctggcgatgcac
gactggtaccaggagacgcacgagcgccagcgagagctgggcatcaccgtcctgggcagc
aacagcaccgtggccatgcaggatgagaccttcccagcatgcaaagtggagttctga
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integrated database retrieval system
