Alosa sapidissima (American shad): 121677434
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Entry
121677434 CDS
T11137
Symbol
chaf1a
Name
(RefSeq) chromatin assembly factor 1 subunit A isoform X1
KO
K10750
chromatin assembly factor 1 subunit A
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121677434 (chaf1a)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
121677434 (chaf1a)
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Gene cluster
GFIT
Motif
Pfam:
CAF1-p150_C2
CAF1A_acidic
CAF1A_dimeriz
Motif
Other DBs
NCBI-GeneID:
121677434
NCBI-ProteinID:
XP_041912092
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Position
12:2498042..2550846
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AA seq
862 aa
AA seq
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MVVMLAAEDPSADGPLASTPEKSSGMDCGDKSNSAKRLIQARLPFKRLNPELKGNLGTKR
ARGPPTSYLGSGVSDGENDTNDTSPPQCLRPAIVNGRGPLDGFVIKKRQPLFSPCVPVAV
VDLTEDSNSSDTVKQKSEAVPAPSSAPTDDCIFLSDQNSSHTINSNTSVPVTEEQGDGQV
EENDHMKNTEMEDNMQGDFENELRHENGLRLSAASSSSLSTVESSPDSHKTGHCLPSSSI
TEPDGDSEMKKVKRSSPKNLKQREERELQRAEREKQRMEAKAANEKKKLEARRLKEEKER
ERRERKEKEEREKREKKEKDEKEKAEKLRAKEEQRKSKQEAKEEEKRKKVEEKRMKEEKD
RIKAEKAEITRFLQKPKTQLAPKTLASACGKFAPFEIKENMCLAPVCRVQCENAVLEQLD
QYLAKPDRSITWLKELTWRKPRCCGPTEPKHQDPESNSLVVMKGPQPDQQHRGRMKLLQF
HENYRPAYWGTWSKKSTCISARCPLLQDKELFDYDVDSDEEWEEEEPGESLSHSEGDDDE
DGDDDDDDDGFFVPHGYLSDGEGAREEEEGGDPEKQTLHQKLKAREWDELLSKKRVKVLE
AVINGCLWEGEIEFSHAQLEVLQAHAISVLEPLPKDEPTSPETSTGEQRNELLHQLLPLL
HGNVNSSKVIISEFQEFCRQQAVSLVSSPQGFADSIPTRVGLKRLIKESAVYEKRSCFRR
CCWYVHADILARFSLESLPVPCQWNYLTPGVQQCREDSLIPMNSQGNSPTTPQPTTALSI
KRKTAGSMSITKFMKKCVDQEQAEVMETDGFQADTEDEEEDCVYINTESGFLTQNGSSSS
PKPDKLEQVEVNTSTAVLLPCP
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgatgctggcggcagaagacccatctgcggacgggcctttggcctctactccc
gaaaaaagtagcggtatggattgtggtgacaaaagtaattctgccaagagacttatccaa
gcccgtcttcctttcaaacggctcaatcctgaactgaaagggaacttgggaacaaagaga
gcaagaggtccccccacctcataccttggaagtggagtttctgatggagagaatgataca
aatgacacttctcctccacagtgtcttcgaccagccatcgttaatggacgtgggccatta
gatgggtttgtaattaaaaaaaggcaaccgcttttttctccctgtgtacctgtggcagta
gttgacctaacagaagattccaattcctctgacactgtcaagcagaaatcagaggctgta
ccagcaccctcttctgctcccacagatgactgcatatttttaagtgatcagaattcttca
cataccatcaattccaacacttctgtgcctgtcacggaggaacagggtgatggccaagta
gaagaaaatgaccacatgaagaatactgaaatggaggacaatatgcaaggagattttgaa
aatgaattgagacatgagaatggtttgcggttatcagctgcctcttctagttctctatca
actgtggagagctcaccagattctcacaagactggtcattgcctgccatcatcttcgatc
acagaacctgatggggattcagagatgaaaaaggtgaaaagaagctctcctaagaaccta
aagcagagggaggaacgggaactacagcgtgctgagagagagaaacagcggatggaagcc
aaagctgcaaatgagaaaaagaagctagaggctcgtagactgaaggaagagaaggagaga
gagaggagggagaggaaagaaaaagaagagagggaaaagcgagaaaaaaaggaaaaagat
gagaaggaaaaggcagaaaagttaagagcaaaggaagaacaacgcaagtctaagcaagag
gcaaaagaagaagaaaaaagaaagaaggtggaggagaaacggatgaaggaggaaaaggat
aggattaaagcagagaaagcagagatcacacgcttcttgcagaagcccaagactcagctt
gccccaaagacgcttgcctccgcttgcggcaaatttgccccattcgagatcaaagaaaac
atgtgtttggcgccagtgtgtcgggtgcagtgcgagaatgcagttttagagcaactagac
caatacctggctaagccagacaggagcatcacttggttgaaggaattgacgtggcggaag
ccacgttgctgtggtccaacggaacctaaacaccaagatccagaaagcaacagtctggta
gtgatgaagggaccacagcctgaccagcagcatcggggtcggatgaaactcctgcagttc
catgagaattacaggcctgcttactggggtacctggagtaaaaagagcacatgtatttct
gcacgctgccccttactgcaagacaaggagctttttgactatgatgtagacagcgatgag
gagtgggaggaagaagagcctggagagtctttatcacacagtgagggagatgatgatgag
gatggagatgatgacgacgatgatgatggtttttttgtaccacatggatacctgtcagat
ggggaaggggcacgggaggaggaggaggggggtgaccctgagaagcagacgttgcatcaa
aagctgaaggctcgtgagtgggatgagctgctttctaagaagagggtgaaggtgctagag
gctgttattaatggctgcttatgggaaggagagattgaattttctcatgctcagctggaa
gtgctgcaggcccatgctatctctgttctggagcccctccccaaagatgagcccacctca
cccgagacttcaacgggagagcagcgtaatgaattgcttcaccagcttctaccattgcta
catggaaatgtgaacagcagtaaagtaatcatctcagagttccaggagttttgtcgtcag
caggcagtttctcttgtgagcagcccccagggttttgcagacagcattcctaccagagtg
ggtctgaagcgtctgattaaggagagtgctgtgtatgagaaacgatcttgctttaggcgc
tgctgttggtatgtccatgcagacatcttggcacgtttcagtcttgagtcgttacctgtg
ccctgtcagtggaactacctcacacctggtgttcagcaatgtcgtgaggattccctgata
ccaatgaattcacagggcaactcaccaactaccccacagcctactaccgctctttctatc
aagaggaaaactgctggcagtatgtcgatcacaaagttcatgaagaagtgtgtagaccag
gaacaagcagaagttatggagacagatggttttcaggcagatacagaggatgaggaggaa
gactgtgtctacatcaatactgaatctggattcctgacacagaatggcagctcaagctca
cctaagccagacaaactggaacaagtggaagtcaacacttctactgctgttctattacct
tgcccatga
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