Alosa sapidissima (American shad): 121677435
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Entry
121677435 CDS
T11137
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asad02000
]
121677435 (tmc6b)
03037 Cilium and associated proteins [BR:
asad03037
]
121677435 (tmc6b)
Transporters [BR:
asad02000
]
Other transporters
Pores ion channels [TC:
1
]
121677435 (tmc6b)
Cilium and associated proteins [BR:
asad03037
]
Other cilia and associated proteins
Stereociliary proteins
121677435 (tmc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
121677435
NCBI-ProteinID:
XP_041912095
LinkDB
All DBs
Position
12:1180237..1249060
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AA seq
814 aa
AA seq
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MARSVNFNPDSHHLEAEMESPIDEAAVHDSFSHLIEEQVQGFPNALEMDQLELDDEARDD
VGYLVNPVMRQEECHQQGDPHIEHWSSATLRILSSMPSRTIGRSRGAIISQYYNRTMQLR
RRRQSRPSIRDFSHSSRPSIRGYGGVESDLGDLHEEETKRERLVNNLQNLSVSDRVRMLR
AMPLSVSEKTELRHLALWHKERSFSRSNIPCCSQFKYYLITAARQTWYSWLSLLSSLQLW
QTALKTVSGRFGTGVLSYFVFLRTLLFFNIFLFSVTGLFLVLPQAVFPPVLSNTTGLSGL
ELLTGGGYFTESVMFYGYYTNVTLKKDCVSKESISSTLSEVGCHGGLSYNMPLAYFFTIG
GTFFVTCIILVYTMSKLFGQSFRIDKSQSILAMKVFCSWDFKVIKKTSVKLQSENISTLL
KELLAEISHKKGEAPIRQRLGRISMHLLAWSMCVGSILACVFAVYYFSEYMYEEFRAKYS
KSSDSPSLLALPVVVSSINLLLPGFFNIVASMEKYDSPSVHTYVSISRNLMLKVSVLGIL
CYHWLGRIAANPQSLVCWETFVGQELYRFLVMDFIFTVLDTFFGEFLWRLFSQKLLKRRR
KPVFDIARNVLEMIYGQTLAWMGLLFTPLLPAVQIIKLICLFYMKKTSLMMNCQVPRKPW
RASQMTTIFITLLCFPSFLGAAVCVTCTMWSIKPSQSCGPFRGLQTMIQSGKLWVKQLES
ANSNLAWLTWVHTYLVENPVIFLFLTAMIFFIVIYFHTQVVDGQRKIITLLQHQIENEGE
DKKFLITKLQAIHEQSRPLSSQRIRGTSEDSSYY
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaagtgtgaacttcaatccagattcacaccaccttgaagcagaaatggaaagc
cccattgatgaagcagcagttcatgactccttcagtcacttgatagaggaacaggttcag
ggctttccaaacgccctagaaatggatcagttggaacttgacgatgaggccagagatgat
gtaggctacttggtaaacccagtgatgcgacaggaagaatgccaccaacaaggagatcca
catattgaacactggtcctctgctactctaagaattctgtcctcgatgccgagccgcaca
attggccgcagtcgtggtgcaatcatctctcagtactataaccgcactatgcagttgcgc
cgccgcaggcaaagtcggccatctatacgtgacttttcccattcttcccggcccagtatc
cgtggttatggtggagtggagtcagacttgggggatttacatgaagaggaaactaagaga
gagcgccttgtgaataacctgcaaaacctgagtgttagtgatcgtgtgcgaatgcttagg
gctatgcccctaagtgtttcagagaagactgaactcaggcatctggcactttggcataaa
gagcgttcattttctagaagcaacatcccttgctgcagtcaatttaaatattatctgatc
actgctgcaagacaaacttggtatagttggctgtcactactgtcatccctgcagctttgg
caaaccgcactgaagacagtgagcggacgttttggcacaggcgtcctctcgtattttgtt
ttccttagaacgcttcttttcttcaacatcttccttttctctgttactgggctcttttta
gtactcccacaggctgtgttccccccagtgctctccaacaccacaggactgtctggtctg
gaacttctcactggagggggttatttcacagagtcagtcatgttctatggatactacaca
aatgtcacgctgaagaaagactgtgtttcaaaagagtccatttcatcaactctaagtgaa
gtagggtgtcatggaggtctttcctacaacatgccccttgcctacttctttaccattgga
ggtaccttctttgtcacctgcatcattcttgtttacactatgtcaaagttatttgggcaa
agtttcaggattgataagtctcagagtatcttggccatgaaagttttctgctcctgggat
tttaaagtcatcaagaaaacgtctgtcaaactgcaatcagaaaatatctccacattgctt
aaagagcttttagcagagatcagtcataaaaaaggggaagcacccatccgtcaaaggcta
ggtcggatctcaatgcatttgctagcctggtccatgtgtgtgggaagcatcttggcttgc
gtctttgctgtctactacttctctgaatatatgtatgaggagttccgagcaaaatacagc
aaatcatctgacagccctagcctgcttgctctgcctgtggtagtgtcaagcattaatctc
ctgctgccaggtttctttaatatagtggcctcaatggagaagtatgactcacccagtgtg
cacacctatgtttctattagcaggaaccttatgttgaaagtgagtgtccttggcattttg
tgctatcattggctgggtcgcattgcagctaacccgcagagtcttgtgtgttgggagaca
tttgttggccaggagctatacagattccttgtgatggatttcatctttactgtactggat
acattctttggggaatttttgtggaggttgttttcacagaaactgctaaagaggaggagg
aaacctgtgtttgacattgcacggaatgttctggagatgatatatggacaaacacttgct
tggatgggtttgctgtttacgccattgttgccggcagtacaaattataaaacttatctgc
ctgttttacatgaagaagaccagtttgatgatgaactgccaggttccaagaaaaccatgg
cgtgccagtcagatgaccacaatcttcattaccctgctatgttttccctcttttctgggt
gcagctgtgtgtgtcacatgtacaatgtggtcaatcaaaccatctcaaagctgtggacca
ttccgtggcctgcagaccatgattcagtctggaaaactctgggttaaacagctagagagt
gccaactctaacttggcctggctcacttgggtgcacacttacttggtggagaacccggtg
atcttcctttttctcactgccatgatcttcttcattgtcatctacttccacacgcaggtg
gtagatggacagaggaagataatcactcttcttcagcatcaaattgaaaatgaaggggag
gataaaaagtttctgatcaccaaactgcaggcaatccatgaacagagtcgacctttgtct
tcccaacgaatcagaggaactagtgaggactccagttattattga
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