Alosa sapidissima (American shad): 121677511
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Entry
121677511 CDS
T11137
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121677511 (sox2)
Transcription factors [BR:
asad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121677511 (sox2)
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GFIT
Other DBs
NCBI-GeneID:
121677511
NCBI-ProteinID:
XP_041912195
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Position
12:complement(6378916..6380934)
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AA seq
314 aa
AA seq
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MYNMMETELKPPAPQSTGGTGNTNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDK
YTLPGGLLAPGGNGMGSGVGVGAGLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQHP
GLNAHNTAQMQPMHRYDMSALQYNSMTSSQTYMNGSPTYSMSYSQQTTPGMTLGSMGSVV
KSESSSSPPVVTSSSHPRAAPCQTGDLRDMISMYLPGAEVPEQTAQSRLHMSQHYQSAPV
PGTTINGTLPLSHM
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgaactcaaacccccggcaccccaatcaactgggggtacg
gggaatactaactcttctggaaacaaccagaaaaacagtccggaccgagttaaaagaccc
atgaatgccttcatggtgtggtctaggggacagcgaagaaagatggcgcaggaaaacccc
aaaatgcacaattcggaaataagcaaaagactcggggccgaatggaaacttctttccgag
agcgagaagcgaccttttattgacgaagccaagcgtctccgtgctcttcacatgaaggaa
catccggattataaatacagacccaggcggaaaaccaagaccctgatgaagaaggacaag
tacactcttccaggtgggcttcttgcaccgggcggtaatggcatgggctctggggtgggt
gtaggggctggcctgggcgccggggttaaccagaggatggacagttatgcacatatgaac
ggatggacaaacggaggctatggtatgatgcaggaacagcttggctacccgcagcacccc
ggactgaacgcgcacaacacagcacagatgcagcccatgcaccgttatgatatgagcgcg
cttcagtacaattctatgacaagttcgcagacatacatgaacggttcgcccacatatagc
atgtcctactcgcagcagaccacccctggaatgactctcggctcgatgggttcggtggtc
aagtccgagtccagttcgagtccaccggttgtcacctcttcctcacatccaagggctgcc
ccatgccaaactggggacttacgggacatgattagtatgtacctcccgggcgcagaagtt
cctgagcaaactgctcaaagcagacttcacatgtcccaacattatcagagcgcacctgta
cccggcacaacgattaatggcacgctcccattatcacatatgtaa
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