Alosa sapidissima (American shad): 121677529 Help Entry 121677529         CDS       T11137                                  Name (RefSeq) calpain-1 catalytic subunit-like   KO K01367   calpain-1 [EC:3.4.22.52] Organism asad  Alosa sapidissima (American shad) Pathway asad04141   Protein processing in endoplasmic reticulum asad04210   Apoptosis asad04217   Necroptosis asad04218   Cellular senescence asad04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:asad00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     121677529  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     121677529    04217 Necroptosis     121677529    04218 Cellular senescence     121677529  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     121677529  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:asad01002]     121677529 Enzymes [BR:asad01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      121677529 Peptidases and inhibitors [BR:asad01002]  Cysteine peptidases   Family C2: calpain family    121677529 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III CAPN13-like_C_EFh EF-hand_6 Motif Other DBs NCBI-GeneID:  121677529 NCBI-ProteinID:  XP_041912226 LinkDB All DBs Position 1:4513120..4524187 Genome browser AA seq 689 aa AA seqDB search MPPPGVCLNIMKERHKKEGRGSVTNPDKFLDQDFEDLHQYFLKNGFRFLDKMFPPECSSI GDGLLPSNDLARIVWQRPSKIVKDPRFILEGVSRFDFKQGRVGNCWFLAAIGALTFQEDM KKQIIPAGQSFEKDYAGIFHFRFWRFGKWVDVVIDDKLPTIGGRLIFVHSKTHNEFWAAL MEKAYAKVCGSYADMHFGYVSEALMDFTGGVHMTYKLNEAPPDLWDIMLRAAQSKSLMGC GTPAGVSRKNTVLPNGIVDAHAYTITGVIQVLSNNRPVRLIRLFNPWGEGEWRGDWSDKS SKWQTVSPEDRTTCLSICDDGEFWMSMEDFCQSYSDMDICSTSLAFLDASTDWTYKFHEG RWVAWTTAGGCLNNRGSFWINPQYHIKLEPLKGECANDNDKNLLVSLMQKSDKRNRRLDS NFSIGFAIFSVPPEYYGREGKFPAEFFKKNPVASTKQFIKAREVVEFFRLVPGEYIIVPS TFNPNETASFILSIFSKTDSHLDENSIDSWTITKPSLTDQLNDNNSKVTLFKKFTDQYEE VDAEQLQRLLNENLLQGNSSGFGLDTCRSMVALMDLSVTGHLNRHEFLRLWDRVVTYREI FYRTDISRTGDLSLSELRNAMIAAGAQISDSMLNLMALRYGGSKGNLTLESFVYLILRLE CMSKVFRKLSDGNGVYLQEYEWMHLTMYS NT seq 2070 nt NT seq  +upstreamnt  +downstreamnt atgcctcctcctggtgtgtgtctgaatattatgaaggaacggcataagaaagagggcaga ggatctgtcaccaaccctgacaagttcctggaccaggactttgaagatctacatcaatac tttctcaagaatggatttaggttcttagataaaatgtttcctccggaatgtagttccatt ggagatggacttctcccatcaaatgacctggcaagaattgtgtggcaaagaccaagtaaa attgtgaaagaccctcgttttattctcgaaggagtgtccaggtttgacttcaagcaaggt cgagttgggaactgctggtttcttgccgctattggagcgctgacatttcaagaagacatg aaaaaacaaattataccagcaggacaatctttcgaaaaggactatgcagggattttccac ttcaggttctggagatttgggaagtgggttgatgtggtgattgacgacaagcttccaact attggtgggagactgatatttgtacactcaaaaacccacaatgagttttgggctgcgctg atggagaaggcctatgctaaggtttgtggctcctatgctgacatgcactttggctacgtg tctgaggccctgatggacttcacaggcggcgttcacatgacatacaagctgaacgaagcc ccccctgacctctgggacatcatgttgagagccgcccagtccaaatccctcatgggctgt ggtactccagcaggggtcagtcggaaaaacactgttttgcctaatgggattgtggacgcc catgcctacacaattacaggagttatacaggtcctgagtaataatcgccctgttagactg atcaggttgttcaatccgtggggcgaaggagagtggaggggtgactggagtgataagtca tccaaatggcaaactgtcagtccagaggaccgtacaacttgcctctccatctgtgacgac ggtgaattttggatgtcaatggaggatttctgccagagctattctgacatggacatatgc tccacgagccttgctttccttgatgcatccacagactggacatacaagtttcacgaggga cgatgggtcgcttggaccactgctggtggctgtctgaataacagagggagtttttggata aaccctcagtatcacataaagttggaacccctgaagggtgaatgtgctaatgacaacgac aagaacctactcgtgtccctcatgcagaagtctgacaaaaggaacaggcgccttgactcc aacttcagtattggcttcgcgattttcagtgtgccacctgagtactatggaagagagggg aagttccctgcagagttcttcaagaagaaccctgtagcttcaaccaaacaattcataaaa gctcgagaggttgttgagttcttcagattggttccgggcgagtatatcattgtcccgtcc actttcaacccaaatgagacggcttccttcatcctgtccatattctccaagacagacagc catcttgatgaaaattccattgacagttggacgattacaaagcccagtctaactgaccaa ctaaatgacaacaactccaaggttaccttattcaagaagttcactgaccagtatgaagaa gtcgatgcagagcagctacagaggcttctgaatgagaatcttcttcaaggcaactcctca ggctttggcctggatacctgtcgcagtatggttgccttgatggatctctctgtcactggc caccttaatcgccatgaattccttcgactgtgggaccgagtggtcacatacagggaaatc ttttaccgcactgacatttcaaggactggtgacttgtcccttagtgaactgaggaatgct atgattgccgcaggtgcgcagattagcgatagcatgctgaacctcatggctttgcgctac ggtggctcaaaaggaaacttaacgctggagagctttgtgtacctcatcctgcgcttggag tgcatgtccaaggtcttcagaaagctgtcagatgggaatggagtctatctgcaagagtat gagtggatgcatcttaccatgtattcctaa

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