Alosa sapidissima (American shad): 121677532
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Entry
121677532 CDS
T11137
Symbol
efcab7
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 7
KO
K23852
EF-hand calcium-binding domain-containing protein 7
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
121677532 (efcab7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121677532 (efcab7)
Cilium and associated proteins [BR:
asad03037
]
Primary cilia and associated proteins
EVC complex
121677532 (efcab7)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_FSTL1
EH
SPARC_Ca_bdg
EF-hand_11
EF_assoc_2
LZ_Tnp_IS66
PH_35
Motif
Other DBs
NCBI-GeneID:
121677532
NCBI-ProteinID:
XP_041912227
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All DBs
Position
12:4433790..4451571
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AA seq
604 aa
AA seq
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MLKSHRTEEENFYINCRAAYLAVFKSSLSNITSREQLCHVLQQAGHNPSQKLLNKYWTPR
TKRLNFDDFCDIMQKEKPTEHGEILRVFTKLDINGDGFISHKELHKVLTTSGEKMTDEEV
NEIFSLFDINKDGKLDYPEFCRMLESTAEQCQAAAQEKLEADAKLKRQNFGNQSDNSPKT
TTPPHQESLQKGEPDAALLRRDSRSTSRPSSARSRRSSISMAITMAAASTRSAKLLEPKS
LQEWHHSHLKGCFFLEEDGTIVSLQYRLHISQTTTVYLTIQPLNLSQTPDKPSPWMSVDT
ALLVLTSNEGKEDSNVVCVTELRDKEKCVWKGELSEGTYILLPLSTGCRLVRSRKPELTG
AELVYRNQDSGELELTKEFRAALSTIFDVIDLDGNDLLSLEEYNLFEERTSGEKCDEDAW
AVCKENFDTKKNMLTRQGFLELNLMEANDREGDPRDLWITLEAMGFNRALDMVEACPFII
DVHCEDVKPILQAVNLESAARTLNTALQRSVINRGEARPIKGQDGVTVYTYRGESRISSV
IANKSNQRVVVQVNNEQSRNCVNSRGLSVFAVEVPARTKIVCQHVMPLNEKQEWIYSCVE
SIVS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaatcacatcgaaccgaagaggagaatttctatataaactgcagggcagcatac
ctggctgttttcaagtcaagtttatcaaacatcacttccagagaacagttatgccacgtt
cttcaacaggcaggacataatccctcacagaagctcctgaataaatactggactcctagg
accaagaggctgaattttgatgatttctgtgacataatgcagaaggagaagccaacagaa
catggtgaaattctcagagtatttacgaaacttgacattaatggagatgggttcatctca
cacaaagaactgcacaaagtcctcaccacgagtggtgagaagatgactgatgaagaagta
aatgagattttctcattatttgacatcaacaaagatgggaaacttgattatcctgagttc
tgcagaatgttggagtccacagcagagcagtgtcaggcagcagcccaggagaaattggag
gctgatgccaaactcaagaggcaaaactttggcaaccagtccgacaactcacccaagacc
acaacccccccacaccaagagtctctccagaaaggtgaacctgatgcagccctcctcagg
agagacagccgctccacttcccggccatcatcggctcgcagtcgccgttcctcaatctcc
atggccatcacaatggcagcagccagcaccagaagtgccaaactgttggaaccgaaatcc
ttacaggagtggcatcatagccatctgaaaggctgttttttcctggaggaagatggaacc
atagtgtctctgcagtatcgactgcacatctcccagaccaccactgtctacctgaccata
caacccctcaacctcagccaaaccccggacaagccatctccctggatgtctgtggacact
gccctgcttgtgcttacatccaatgaaggaaaagaggactcgaatgttgtgtgtgttact
gagctgcgggacaaagagaagtgtgtgtggaagggggagctgagtgagggcacctacatc
ctcctgcccctcagcacgggctgcaggctggtgcgcagcaggaagcccgagctgaccggc
gctgagctggtctacaggaaccaggactcaggggagctggagctcaccaaagagttcagg
gcggcgctgtccaccatatttgatgtgattgacctggatgggaacgatttgctgagcctg
gaggagtataacctgtttgaggagaggaccagtggggagaagtgtgatgaggacgcttgg
gccgtctgcaaagaaaactttgacaccaagaagaacatgctgaccaggcagggctttctg
gagctcaacctgatggaggccaatgaccgtgaaggagacccccgggacctgtggatcacc
ctggaggccatgggcttcaacagggccctggacatggtggaggcctgtcccttcataatc
gacgtgcactgtgaggatgtgaagcccatcctgcaggcagtgaatctggagtcagccgcc
aggacactcaacacggcgctgcagcgctcagtcatcaacagaggagaggccaggcccatc
aagggtcaggatggcgtcactgtgtacacataccgaggggagagccggatctcctcagtc
atcgctaacaagagcaaccagagagtggtggtgcaagtgaacaacgagcagagtaggaac
tgtgtcaacagcaggggactgagtgtgtttgctgtggaggtgcctgccagaaccaaaata
gtttgccagcatgttatgcctctaaacgagaaacaggagtggatttacagctgtgtggag
agcatcgtatcataa
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