Alosa sapidissima (American shad): 121677584
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Entry
121677584 CDS
T11137
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121677584 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
Ank_3
Ank_5
NODP
Ank_4
EGF_3
EGF_Teneurin
JAG1-like_EGF2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
121677584
NCBI-ProteinID:
XP_041912320
LinkDB
All DBs
Position
12:complement(20979709..21027385)
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AA seq
2511 aa
AA seq
DB search
MGQFPGISSGKVVFLVICYTQLSFALQCLDTTKPCVNNATCHKYTNATGYCRCNLGYLGE
YCQHKDPCLPGLCKNGGNCTVSVHGVPGNPTCVCPLGFAGQSCETPQNSTCYPKNPCKNQ
GTCSLLALDKYLCHCAHGWTGHDCEQVDSCVSNPCANGGTCAVQSSGAYSCTCPSGWEGP
HCENDTDECADASASSPVCHNKGQCINTLGSYQCSCPQGFTGRHCETPYQPCAPTPCQNQ
GTCRPTSDFNYQCHCLPGFNGTNCEINIDDCPSHDCQNGGTCMDGVNTYNCQCPPEWTGQ
YCTDDVDECHLQPNTCQNGGTCNNMPGSYNCVCVNGWSGPDCSENIDDCAVAACSEGSTC
VDRVASFICVCPHGRTGLLCHIPDACMSSPCREGSQCHSNPINGMYNCMCQSGYRGSTCY
EDIDECSIGTNPCEHNGLCMNTEGSFTCNCAQGYTGPRCEQDVNECLSNPCKNDATCLDQ
IGKYTCICMPGFEGEHCEIEIDECNSSPCLNSGKCRDEVSRFVCDCPQGFTGETCQVDID
ECASTPCLNGAKCWDRPNGYDCECAEGYKGSLCEENIDDCNPKPCHHGVCKDGIATYKCE
CEPGYMGTICNMQIQECHSSPCQNGGRCVDLVNKYQCVCPTGTSGDNCENNYDDCASNPC
MYGECQDGINEYSCVCDPGYTGKKCDVNIDECSSNPCLSGGTCEDKVNGFQCLCPPGTHG
PLCHSGADHCAPLPCRHGDCVEQQDGYRCECKPGWVGQHCQQDKDECQSNPCQNGATCTD
GPNTYTCRCNPGYTGVNCQINIDECESSPCLNQGTCEDAINGYTCKCPLPYTGKHCETEL
APCESKPCQRGGECQPSSDYTSYTCRCPKEWQGPQCTEDVDECRKNPCQNHGRCHNTPGS
YMCTCQPGYGGHNCQNNIDDCAPNPCLNGGTCVDKVGRYSCMCPAGFMGERCEKDINECA
SSPCRHGGNCKDYANSYTCECPPGFHGQNCEHSIPQCSESSCLNNGTCVDGINTHSCRCR
TGFSGLYCEKEIDECESQPCKNGGTCTDDVGTYRCTCPAEYTGSNCQYMADVCSKIVCQN
GGLCSQSKTMWRCSCPEGWSGVYCDVPNISCQAIATQRGTSADKVCQHAGRCEDTGKTHH
CQCQKGYMGSYCEKEVDECLSNPCRNGATCIDYQDAYTCTCKAGFQGVHCEYDVNECQSD
PCKNGGTCHNLVNHFRCSCPPGTRGAQCEENLDDCASDKGQRCLNGGSCVDGIGRYTCSC
RPGFTGEHCEGDINECLSRPCYAPGSLDCVQQVNDYECRCRLGYTGRHCESVVDLCLSKP
CHNNGDCFMNMSSNHGYTCRCQPGFNGFNCGDFEGYTCANLRCQNGGTCQPGGIPQCRCP
AGFGGARCEIIQNCPCHNGGSCVPDPLNRNQVTCRCPHPFQGRHCERLPVLPTPEPSCPY
VQCEQTYGDGWCDQQCKNQECSWDGGDCSLHWPKPWENCTAPVHCWDLFRNGRCDPECDN
PGCLFDNFECQAPSPCKYDDYCKDHYANGYCNQGCNTEACGWDGLDCSEDVPPKLADGTL
VIVVLLQPNELKRDLKGFLRTLSTLLRTNVRVKLDDQKNSMIFPYYGDDKADDSGRGKQR
GKREVSKDAIGSKVYLEIDNRQCAQSSKECFSSTDLAASFIAAEYLKSGLFYPVVQVDSD
HTASPHPPQWLYLCAVAAAIILVILVLGVLAAKRKRKHGILWLPDGFLANNNSKRREPVG
QDDFSLKNMQKPQDGLLDGSQDQCWPEEHPPKKPRMATPQMEDKPLLPMDGAVDRREWTL
QHRKAADITLTPPQADLDMDCLDVNVKGPDGFTPLMLASLRSSGVECASVLGDEEEESGA
DEAGSNVISDLIAQGATLMAQTDRTGETALHLAARYARADAAKRLLDAGADPNAHDNMGR
TPLHAAVAADAQGVFQILIRNRATELDSRMNDGTTPLILAARLAVEGMVEELVHCHADVN
AVDDHGKSALHWAAAVNNVEAVLVLLKNGANRDMQDNKEETPLFLAAREGSFEAAQVLLD
HYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHAGPNHLGGGNGGGHSSMVC
GGAGGAGGFMGMRPGPQGKKNRRGAGAKVSGGAGGPGGGGPKELKDMKAKRRKKPAGGEG
PAGGAAVPVGGGGGGGGGGAVGGNAATAAANAKGPGLSESSVTMSPVDSLESPHSYAGDA
AAASGAATSPPLLSSPTPRQLLPPVSHMLASQQQWVGMGKHGGGGGYGGGGGTMFGTMPH
QMGASHHGMSQHHSPGLLTPMNITMSREQLPPIVTFQMMPGGGQAMLKQSQMPGQMQSQG
QSRPQQGSAHLHCGQMYPMPDVGMSHGMAHQLSHAHSHSHAMPMGMVEGQGRQLPPYQPL
QSPVDKYPTPPSQHSYPNTGSEGTTPGHPTQPASEHPYLTPSPESPDPWSSSSPHSNSDW
SDVTTSPTPLGNVHALAQPCHTHIPEQAQLQPPAQPQTPQAQQPQRSSIYA
NT seq
7536 nt
NT seq
+upstream
nt +downstream
nt
atgggccaatttcccggtatctcttcgggcaaagttgttttccttgtaatttgctacacc
cagttgtcattcgctctgcagtgcctggatactacaaagccatgtgtgaacaacgccacg
tgccacaagtacaccaatgccactggatactgcaggtgtaaccttggctacctgggtgag
tactgccaacacaaggacccatgcctccccggcctctgcaagaatggcgggaactgcacc
gtgagcgtgcacggtgtccccgggaaccccacgtgcgtgtgcccgctgggtttcgccggt
caatcctgcgagacgccccagaactccacgtgctaccccaagaacccctgcaaaaaccag
ggcacctgcagcctgctggccctggacaagtacctatgccactgtgcccacggatggacg
ggtcacgactgtgagcaagtggacagctgcgtctccaacccgtgcgccaacggtggcact
tgcgcagtccagtccagcggcgcatactcgtgcacgtgcccgtccggctgggagggcccg
cactgcgagaacgacacggacgagtgtgccgacgcctccgcgtcgtcgccggtctgccac
aacaaagggcagtgcatcaacacgctgggctcctaccagtgcagctgcccgcagggcttc
accggacggcactgcgagaccccctaccagccctgcgcgcccacgccgtgccaaaaccaa
ggcacctgccgacccacctccgacttcaactatcagtgtcactgcctgccaggattcaat
ggaacaaactgcgagattaacatcgacgactgcccttcccatgactgccagaatggagga
acctgtatggatggagtcaacacctacaactgccagtgtccacccgaatggacaggtcag
tactgcacagacgatgtggatgagtgccacctgcagcccaacacctgccagaacggtggc
acatgtaacaacatgccgggcagctacaactgtgtgtgcgtcaacggctggagtggcccg
gactgctcggagaacatcgacgactgtgccgtggccgcctgcagtgagggatctacctgt
gtggaccgcgtggcgtcctttatctgcgtgtgcccacacggcaggacaggcttgctgtgt
cacatacctgacgcctgcatgagcagcccctgccgcgagggctctcagtgtcactccaac
cccatcaacggcatgtacaactgcatgtgccagtcagggtacaggggcagcacctgctac
gaggacatcgatgagtgcagcatcggtacgaacccttgtgagcacaatgggctgtgtatg
aacacagagggctcgttcacctgtaactgcgcccagggatacacagggccacgctgtgag
caggatgtcaacgagtgcctgtccaacccatgcaagaacgatgccacctgcctagaccag
attggaaaatacacatgcatctgcatgccaggctttgaaggcgaacactgtgaaatcgaa
attgatgagtgcaacagctctccttgcctgaacagcgggaagtgcagagacgaagtcagc
cgcttcgtctgcgattgtcctcaaggattcaccggtgagacgtgtcaggttgacattgat
gaatgtgccagcacaccctgcctcaatggtgccaaatgctgggaccggcccaatggctac
gactgtgaatgtgccgaaggatacaaggggtcgctgtgcgaggagaacattgacgactgc
aaccccaagccctgccaccatggagtctgcaaggacggcatcgccacctacaaatgcgag
tgcgagccgggctacatgggcaccatctgcaacatgcagatccaggagtgccacagcagc
ccctgtcagaacggaggccgctgcgtcgacttggtcaacaagtaccagtgcgtctgcccg
acgggaacctccggcgacaactgtgaaaacaactacgatgactgtgccagtaacccttgt
atgtatggagagtgtcaagacggaatcaatgaatactcgtgtgtctgtgatccaggctac
acagggaagaaatgcgatgtgaacattgacgagtgcagctccaacccgtgcctcagcggt
ggcacctgtgaggacaaagtgaacggcttccagtgcctgtgcccgcctggcacccatgga
cccctgtgccactcaggggcggaccactgtgccccgctgccctgccgacatggagattgt
gtggagcaacaggacgggtatagatgtgagtgcaaacctggatgggtggggcaacactgt
cagcaggacaaagatgaatgccagtccaacccctgtcagaatggagccacctgcaccgac
gggcccaacacctacacctgcaggtgcaaccctggctacacaggtgtgaactgccagatc
aacatagacgagtgcgagtccagcccctgcctgaaccagggcacctgtgaggatgccatc
aacggctacacttgcaaatgcccactgccctatacaggcaaacactgcgagacggagttg
gctccgtgtgagtccaagccctgccagagaggaggagagtgtcaaccctccagcgactac
acctcctacacctgtcgctgtcccaaagaatggcaaggtccccagtgcacagaggacgtg
gatgagtgccggaaaaatccgtgtcagaaccacggccgctgccacaacacacccggcagc
tacatgtgcacatgccaacctggctacggtggccataactgccagaacaacattgatgac
tgcgcacctaacccctgcctgaatggaggcacctgtgttgacaaagtggggcggtactcg
tgcatgtgtcccgccggttttatgggcgagcgctgcgaaaaggacataaacgagtgcgcc
agctccccgtgtcgccacggcggcaactgcaaggactacgccaacagctacacgtgcgag
tgcccgccgggcttccacggccagaactgcgaacacagcatcccacagtgctctgagagc
tcctgcctgaataacggcacctgtgtggacgggattaacacccactcctgccgctgccgg
acgggcttcagtggcctctactgcgagaaggagattgatgagtgcgagagccagccttgc
aagaacggcggcacctgcaccgacgacgtgggcacctaccgctgcacctgccctgccgag
tacaccggctcaaactgccagtacatggccgatgtgtgcagcaagatcgtgtgccagaac
ggcggcctgtgctcccagtcgaaaacgatgtggcgctgcagctgccccgagggctggtca
ggcgtctactgcgacgtgcccaacatctcatgccaggccatcgccacccagagaggaacc
tctgcagataaagtgtgccagcatgccgggaggtgcgaagacacgggcaagacacaccac
tgccagtgccagaagggctacatgggcagctactgcgagaaagaggtggacgagtgcctg
tccaacccctgccgcaacggcgccacctgcatcgactaccaggacgcttacacgtgtacg
tgcaaagctggtttccagggggtgcactgtgaatacgacgtgaacgagtgtcagtccgat
ccctgcaaaaatgggggcacctgccacaacctggtcaaccacttcaggtgctcctgtcct
cctggcacgcgaggagcgcagtgtgaagagaacttggacgactgtgcctcagataaaggc
cagcgctgcctgaatggcggttcgtgcgtggacggcatcggtcgctacacatgctcgtgc
aggccgggcttcaccggggagcactgcgaaggcgacatcaacgagtgcctgtcgcgcccc
tgctacgccccaggaagccttgactgtgtgcagcaggttaacgactacgagtgccgctgc
cgcctcggctacacaggtcggcactgtgaatctgtggtggacttgtgtctgtccaagcca
tgccacaacaacggtgactgctttatgaacatgagctccaaccacggatacacttgtaga
tgtcagccaggcttcaatggcttcaactgtggtgattttgagggctacacttgtgccaac
ctgcgctgccagaacggaggcacgtgccagccaggcggcatcccccagtgccgctgcccg
gctggctttggcggtgcccgctgtgagatcatccagaactgcccgtgccacaacggtggc
tcgtgcgtgcctgacccgctcaaccgcaaccaggtgacctgtcgttgcccgcatcccttc
cagggaaggcactgtgagcggctgccggtccttccgacgcctgagccgtcctgtccgtac
gtgcagtgcgagcagacatacggggacggctggtgtgaccagcagtgcaagaaccaggag
tgctcgtgggacggcggcgactgctcgctgcactggcccaagccctgggagaactgcaca
gcgcccgtccactgctgggacctcttccgcaacggccgctgcgaccctgagtgcgacaat
cccggctgcctctttgacaactttgagtgccaggcacccagcccgtgcaagtacgatgac
tactgcaaggatcactatgccaacggctattgcaaccagggctgtaacacagaggcgtgc
ggctgggacggcctggactgctcggaggacgtgcctcccaagctggcagacggcacgctg
gtgatcgtggtgctgctgcagcccaacgagctcaagcgcgacctcaagggcttcctgcgc
acgctcagcaccttgctccgcaccaacgtgcgtgtcaagctggacgaccagaagaactcc
atgatcttcccgtactacggcgacgacaaggcagacgacagcggccggggcaagcagcgg
ggcaagagggaggtttccaaggacgccattggctccaaggtgtacctggagatcgacaac
cgccagtgcgcacagagctccaaggagtgcttctctagcacggacctggccgcctccttc
atcgcagcggagtacctcaaatccggcctgttctaccccgtcgtacaagtcgacagtgat
cacacagcgtcgccccacccaccgcagtggctgtacctgtgcgcggtggcggcggccatc
atcctggtgatcctggtgctgggcgtcctggcggccaagaggaagcgcaagcacggcatc
ctgtggctacccgacggattcctggccaacaacaacagcaagcgtcgcgagcccgtgggc
caggacgacttcagcctcaagaacatgcaaaagccccaggatggtctgttggacggcagc
caggaccagtgctggccagaggagcatccgcccaaaaagcccaggatggccactcctcag
atggaggacaagcccctgttgcctatggacggtgcagtggacagaagggagtggacgctg
cagcaccgcaaggccgcggacatcactctcacgcccccacaggctgacctggacatggac
tgcttggacgtcaatgtcaaagggccagacggcttcacccctctcatgctggcgtcgtta
cgtagcagcggtgtggagtgcgccagcgtgttgggcgatgaggaggaggagagcggcgcc
gacgaggccggctccaacgtcatcagcgacctgatcgcccagggcgccacgctcatggcg
cagacggaccgcactggggagaccgccctgcacctggccgcccgttacgcccgggccgat
gccgccaagaggctgctggacgccggcgccgaccccaacgctcacgacaacatgggccgc
acgccgctgcatgccgctgtggctgctgatgcccagggagtgttccagatcctgatccgt
aaccgtgcaactgagcttgattcccgcatgaacgatggcaccacacccctcatcttggca
gcgcgtcttgccgtggagggcatggtagaggaactggtgcactgccatgctgacgtcaat
gctgtcgatgatcatggcaagtcagctctgcactgggcagccgcagtcaacaacgtcgag
gccgttctggtgttgctgaaaaatggagccaatcgagacatgcaggacaacaaggaggag
actcctctgttcctggcagcgcgggagggtagcttcgaggcggcccaggtgcttctcgac
cactactccaaccgcgacatcaccgaccacctggaccggctgccgcgcgacaccgctcag
gagcgcatgcaccacgacatcgtgcgcctgctggaccagtacaacctggtgcacagcccc
cacgccggccccaaccacctgggcggtggcaacggaggcggccactcctccatggtgtgc
gggggcgccggcggcgccggaggattcatgggcatgcggcccggcccgcagggcaagaag
aaccgaagaggagccggcgccaaggtgagcgggggcgctggaggaccgggcggcggtgga
cccaaagagctgaaagacatgaaggccaagcggaggaagaagccggccggaggggaaggg
cctgcaggaggagcagccgtgcccgtgggaggaggagggggaggagggggaggaggagcc
gtggggggtaatgctgccactgctgccgccaatgccaagggccctgggttgtcggagagc
tcggtcaccatgtcgcccgtggattcgctcgagtcgccacactcgtacgccggtgatgcg
gccgcggcgtccggagccgccacgtcgccaccgctgctgagcagccccacgcctcgccag
ctgctgcccccggtcagccacatgctggccagccaacagcagtgggtgggcatgggcaag
catggaggcggcggcggctacggtggtggcgggggcaccatgttcggcaccatgccccac
cagatgggcgcctcgcaccacggcatgtcccagcaccacagcccgggcctgctcacgccc
atgaacatcaccatgagccgcgagcagctgccaccaattgtcaccttccagatgatgccc
ggcgggggccaggccatgctgaagcagtctcagatgcctgggcagatgcagagccagggc
cagagccgcccccaacagggctcggcccacctgcactgtggccagatgtacccgatgccc
gacgtggggatgtcgcacggcatggcccaccagctctcccacgcccactcgcacagccac
gcgatgcccatgggcatggtcgagggccagggccgccagttgcctccgtaccagcctctg
cagagccccgtggataagtaccccacgccgccgtcgcagcacagctaccccaacaccggc
tcggagggcaccacacccgggcaccccacgcagccggccagcgagcacccctacctcacc
ccgtcgcctgagtcacccgacccctggtcctcgtcctcgccccactccaactcggactgg
tcggacgtcaccaccagccccacgccgctggggaatgtgcacgcgcttgcccagccctgc
cacacacacattccagagcaggcgcagctgcagccgcccgcacagccgcagacgccgcag
gcccagcagccgcagcggagcagcatctacgcctga
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integrated database retrieval system
