Alosa sapidissima (American shad): 121677585
Help
Entry
121677585 CDS
T11137
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121677585 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asad03400
]
121677585 (rad54l)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
121677585 (rad54l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Motif
Other DBs
NCBI-GeneID:
121677585
NCBI-ProteinID:
XP_041912321
LinkDB
All DBs
Position
12
Genome browser
AA seq
740 aa
AA seq
DB search
MRRSLAPSQVAKRRSGDSDDDEDWNPEQTRKRRKGDPDCRENLISPYRKPLTQLTNRPVC
VDSGQHEAFIRSILSRPFKIPIANYTGALGIRALGLKRAGVRKALHDPFEVDALVLYEPP
VLSAHDMIKADKDKLPVHVVVDPVLGKVLRPHQREGVKFLWDCVTGRRIPDSFGCIMADE
MGLGKTLQCITLMWTLLRQSPDCKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVQPLAID
GGSKDEIDRKLERFNAQHGLRVPSPILIISYETFRLHAAVLHKGKVGLVICDEGHRLKNS
DNQTYQALNAMNSQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKG
RDADASDKDRATGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQSELY
KRFLRQAKPVESLQGGKISVSSLSSITSLKKLCNHPSLIYDKCVEGEEGFEGALDLFPSG
YSTKAVEPQLSGKMLVLDYILAMTKSTTSDKVVLVSNYTQTLDLFEKLCRTRRYLYVRLD
GTMSIKKRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARVWRDGQKKTCFIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELREL
FSLNEETTSDTHDRFRCKRCVNGRQVRPPPEDADCTSDLSLWQHCSDKRGLKDPMLSAAW
DAAVSFAFHQRSHEDQRGVV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagcttagcaccaagtcaagttgccaaaagaagaagtggtgattccgacgac
gacgaggactggaatcctgaacagacaaggaagagaagaaagggagatccggactgccga
gagaacttaatctccccatacagaaaacctctcacacagttaaccaatcgaccagtatgt
gtggacagcggtcagcacgaggcctttattcgcagcatcctttcaaggccattcaaaatt
cccatagccaactacacaggtgcactgggaatacgagctctgggcctgaagcgggctggg
gtcaggaaggcgcttcatgacccatttgaggtggacgcactggttctttatgagccaccg
gttctgagtgcccatgacatgatcaaagctgacaaagacaaacttcctgttcacgttgtt
gtggatccagtgcttggcaaagtacttaggcctcatcagcgagagggtgtaaagttcctt
tgggactgcgtgacagggagacgtatccctgactcatttggctgcatcatggcggatgag
atgggtctgggcaagactctgcagtgcatcaccctcatgtggacactgctgcgtcagagc
ccagactgtaaaccagagatagacaaggccatcgtggtctctccctctagcttggtgcgc
aactggtacaatgaagtcggcaaatggctgggaggacgtgttcagccgctggctattgat
ggcggctcaaaagatgagattgatcgcaaactagagcgcttcaatgcacagcatggcttg
agggtgccttctccgatccttatcatttcatatgaaacgttccgtctgcacgctgcagtc
ctgcacaagggaaaagtcggcctggtcatatgcgatgagggtcaccgactgaagaactca
gacaaccagacctaccaggcactgaatgccatgaattcccagagacgagtgctcatatct
ggcactcccattcagaacgacctgctagaatatttcagcctggtgcactttgtcaatgcc
ggaatccttggcactgcgcaggaatttaagaagcgctttgagcttcccatcctgaagggt
cgtgatgcagacgccagcgataaggatagggccactggagaggagaaactcaaagagctt
attagcattgtgaacagatgcctgattagaaggacttcagacatactctccaaatatctc
ccagtgaagatagagcaggttgtctgttgcagactcacccctctgcagagtgagctgtac
aagcgcttcctgcggcaggccaagcctgtggaaagccttcaggggggcaagatcagtgtc
tcctccctctcctccatcacctcgctcaagaaactctgcaaccatccttctctcatctat
gacaagtgtgtggagggagaggagggctttgagggggccctggatctcttcccatctggc
tacagcacaaaagctgtggagccgcagctctctgggaaaatgctggtgctggattacata
cttgcgatgacaaaaagtacaacaagcgataaagtggtactggtctccaactacacccaa
actctggaccttttcgagaagttatgtcgaactcgaagatacctctatgttcgcctggac
ggaaccatgtctatcaagaaacgggcaaagatagtggagaggttcaacagtccttctaat
cccgagttcatcttcatgctgagcagcaaggcaggaggatgtggcctcaatctgattgga
gccaaccggctggtgatgttcgaccccgactggaatccagccaatgacgaacaggccatg
gcccgtgtgtggagggatgggcagaagaagacctgcttcatctacaggctgctttccacg
ggtactattgaggagaagatcctgcagaggcaggcccataagaaggcccttagcagctgt
gtggtggacgaggagcaggacgtggagagacacttctcccttggagagctgcgagagctc
ttttccctcaacgaggagaccaccagcgacacgcatgaccggttccgctgcaagcgctgc
gtaaacgggcgccaggtgcggcctcccccggaggacgcagactgcactagtgacctgtcc
ctctggcagcactgctcggacaagaggggcctgaaggacccgatgctctcggccgcctgg
gacgcggccgtctccttcgccttccaccagcgctctcacgaggaccaaagaggagtggtg
tga
DBGET
integrated database retrieval system
