Alosa sapidissima (American shad): 121677703
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Entry
121677703 CDS
T11137
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121677703 (si:dkey-183n20.15)
Enzymes [BR:
asad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121677703 (si:dkey-183n20.15)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121677703 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-Nse
DUF1232
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121677703
NCBI-ProteinID:
XP_041912539
LinkDB
All DBs
Position
12:complement(13409327..13415156)
Genome browser
AA seq
242 aa
AA seq
DB search
MLTCHSSQSRVSQTEEARRGQAQPGHSCQSTLDLGGHQHVRCDEDLCVSGAVRDLHCPVC
LQMATFPVETNCGHLFCAPCLISYWKHGSWLDAISCPLCRQKVSILCHLFPESRSDCQQR
EVLGHIKDYNKRYSGAPRRVTDYLYDMPLFLHLALRGLGNMGGLVWLFLLRVAVCGFGAA
MSLASPLEGASGPFCGALGLLDDLVVVFLLLICVININQRMTPDATARNRSATQGVLTDT
LL
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgctcacctgccatagctctcagtccagggtgtcccagacagaagaggccagaaggggt
caggcccagcccggccactcttgtcagagtacccttgacctgggaggccaccagcacgtg
agatgtgacgaggacctatgcgtttcgggtgctgtcagagacttgcattgccctgtgtgt
ctgcaaatggccacattccctgtggagaccaactgtggacacctcttctgtgctccctgt
ctgatatcctactggaagcatggctcctggttagacgccatcagctgccctctctgtcga
cagaaggtgagtatcctgtgtcacctcttccccgagagccgttcggactgccaacagcgg
gaggttctgggccacatcaaagactacaacaagcgttattctggggcccctcgccgggtg
acagactacctgtacgacatgcccttattcctgcacctggcactgcgtggcctgggcaac
atgggcggccttgtgtggctcttcctgctgagggtggccgtctgcggtttcggggcagcc
atgtccctggcctcacctctagagggcgcctcgggacccttctgcggagcactggggctc
ctggatgaccttgtggtagtcttccttctcctcatctgtgtcattaatatcaatcagcgg
atgacgccagacgcaacagccaggaatcgttcagcaacacaaggtgtgctgaccgacaca
ttattgtga
DBGET
integrated database retrieval system
