Alosa sapidissima (American shad): 121677733
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Entry
121677733 CDS
T11137
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121677733 (hps3)
Membrane trafficking [BR:
asad04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
121677733 (hps3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121677733
NCBI-ProteinID:
XP_041912589
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Position
12:26618028..26631043
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AA seq
1078 aa
AA seq
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MVHVYNCHPFASQHIVPTEQEPGPVCCGGDALFVVSAGGCKIEAYQMQEEGCPLICRFAT
MGTVHSILHSQIGDYLVTIEEKNKATYLRAYTNWRYQAVEKTRVGVRLLGHLLRGSASLR
GIPKEQMEIIEIPLFEPPLCVSCCPLTGDLLVGCAKSLVLFTLRRQTLNDRLSVLDFERL
LILHIPGWTPSQVALCAGYVAMQADLEVLVFQLQRPQPGKEQQQKEEEEMAQQLQLHALV
PKDMISRTDRLSVSDSGIGDSEMKKEVTGHLEPEDFYMFPKNQEMLGEQAKDCGVCVTLE
WTGVESEAGFDTGVTYILYRRFAPDFFQGNSVEDTCLHSLQLYPVFTSNQEATGEAKSPD
PACVFCFFSLPNTGYMYSITGSAELVSSYQYPEKAQQAVLSSHFLHVITKNALQCFSVRC
SAVAARAQDPYIDTTVKACPPYTMEVCALRIQLFIGLKALCHDRNHIVLLTAADVESKED
MERAARKSLESKDHKTLTGILLAVGIEPSSNPALESLLSRSFLDKHNWLMDTLRSAAGSS
RKTSITKPKEPSESGHGWNLYVVNTVSSLTLYREMVEYSKKYEVSDPFSLSCIHLLSEAH
LLLRASLLDPLVEPAERAEVQQAFRENCAQLGDCYSRFDKRDSHQALPYYKMSGLSVTEV
IQRNMCPADSPPEYGKGFLFFLRHSLEEEDMEELSEEAANTVLDIFSVAEPGQLPHVVSS
PFMLKSDPAFTLAHLDRLEAVGAPTVTLTLAKASLALRMGDMQLYQQQMERHAEMLQVYG
FIEEPKLLLLGRGKAVVPTPLARHLHLTQQGLLVAAAVALHENNRVKLEEADLFFQELCK
EAPEAAGNPQLLVDFWEALLVASSQEAVIQELLFRLTSVYIDHISRQQQPSARPLKTADD
LMNSCLHYGQLYPWVGILTPAHLRCTQGHQEDLQKLQSLLCGPTLDVSSILPLLEQLPDS
DNAGLSVHVLCATRLGHTESSIERLLDRCPQAIISFAQDELKNDKMALWWQKLFPELCER
TRTAGDDNSILLTALKETLVVVAMELNPLEFLELLPDDGTAQFFLPHLLECSQRNLMT
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggttcatgtttataattgccacccgtttgcttctcaacacattgtgcccaccgagcaa
gagcccgggccggtttgttgcggcggagatgcacttttcgtggtctcagctggaggatgc
aagatcgaagcgtaccagatgcaagaggaaggatgccctctcatctgtcgatttgcaaca
atgggaacagtccatagcatattacacagtcagataggagactatcttgtcaccatcgag
gaaaaaaataaagccacatatctccgtgcgtacactaattggcgataccaggcggtcgag
aagacacgagtaggtgtccgactacttggccacttgctacgaggttctgcgtcgctccga
ggcattcccaaggagcagatggagataatcgaaattccgctattcgagccgcctctctgc
gtatcctgttgtccgctcacaggtgacctcctagtgggctgcgctaaaagcttggtgtta
ttcacgttgcgacggcagacgcttaacgaccgtctctctgtgctggatttcgagcgtctc
ctcatacttcatatcccaggctggacgccctcgcaggtggccctgtgcgccggctatgtg
gccatgcaggcagacttggaggtgctggtctttcagctgcagaggccccaacctggcaaa
gagcagcaacagaaggaggaagaagagatggcccaacagctacaactacatgccctggtt
ccaaaggatatgatctccagaacggacaggctcagtgtcagcgactctggtattggtgac
agtgaaatgaaaaaggaagtgacaggccacctggaaccagaggacttctatatgttccca
aagaaccaggagatgcttggggagcaggccaaggactgtggtgtatgtgttactctggag
tggactggtgtggagagtgaggccggctttgacacaggagttacctacatcttatacagg
cgctttgctcctgatttcttccaaggcaacagtgtggaggacacctgtctgcattccctc
caactctatccagtgttcaccagtaaccaggaagccactggtgaggccaaatctcctgac
cctgcctgcgtgttctgtttcttctcactgcccaacaccggctacatgtacagcatcaca
ggctcagcagagctagtctcgtcttaccagtacccagagaaggcccagcaggctgtgctc
agtagccatttcctgcatgtcatcaccaagaatgcccttcagtgtttctctgtgcgctgt
agtgcggtggctgccagggctcaggacccctacatcgacaccaccgtgaaggcttgtcct
ccctacaccatggaggtttgtgcattgcgcatccagctcttcatcggtctgaaggccctt
tgccacgacaggaaccacattgtccttctgaccgcagcggacgtagagagcaaagaggac
atggagagagcggcccggaagagcctcgaatcaaaagatcacaaaactctaacggggatt
ttgctagcggtaggcatagagccatccagcaaccccgctttggagagcctcctatccagg
tccttccttgataagcacaactggctcatggacacattgagatcagcagcaggaagctct
agaaagacttccatcaccaaacctaaggagccaagtgagagtggccatggctggaacctc
tacgtggtcaacactgtctccagtctcacgctctacagagagatggtagagtacagtaag
aagtatgaggtgtccgaccccttctctctgagctgcatccacctgctgagcgaggctcac
ctgctgctgcgtgcttcgctgctggaccccctggtggaacccgcggagagggcagaggtc
cagcaggccttcagggagaactgtgcccagcttggagactgctacagcaggtttgacaag
agggacagccaccaggcgctgccttactacaaaatgtccgggctgtcagtcaccgaggtg
atacagaggaacatgtgcccggcagactctcctccggagtatggcaaaggcttcctgttc
ttcctcaggcactctctggaggaagaggacatggaggagctcagtgaggaggctgccaac
actgtgctggacatcttcagtgtggccgagccgggccagctgcctcacgtggtcagcagc
cccttcatgctgaaaagcgacccggccttcaccctggcccacctggaccggctggaggcc
gtcggagcccccacggtcacgctcaccctagccaaggcctccctggcgctgcgcatgggg
gacatgcagctgtaccaacagcagatggagcgccacgcagagatgctgcaggtgtacggc
ttcatcgaggagcccaagctgctgctgctaggccgggggaaggccgttgtgcccacgccg
ctggctcgccacctccacctcacccagcagggcctgctggtggcagccgccgtggccctg
cacgagaacaacagggtcaagctggaggaggccgacctcttctttcaagagctgtgtaag
gaggcccctgaggcagcgggcaaccctcagctgctggtggacttctgggaggccctgctg
gtggcctcctctcaggaggcggtcatccaggagctgctcttccgcctcacgtccgtctac
atcgaccacatcagccgccagcagcaacccagcgctaggccactcaagacagcagacgac
ctgatgaactcctgtctccattatggtcagctctacccctgggtaggcattctaacgcct
gcacacctgcgctgcactcagggccaccaggaggacctacagaagcttcagtctctgttg
tgtggccccacactggatgtctcgtccatccttcctctgctggagcagctgcctgactcc
gacaacgcagggctgagcgtgcacgtgctgtgcgccacccggctcggccacaccgagagc
tccatcgagcgtctgctggaccgttgcccacaggccataatctcatttgcccaagacgag
ctaaagaacgacaaaatggctctgtggtggcagaagctgtttccagaactgtgtgagaga
acccgaacagcaggagatgacaacagcatcttactgactgcactgaaagaaacacttgtc
gtggttgccatggagctgaatcccttggaattcctggaactgttgccagacgacggtaca
gcgcaattcttcctgccgcatctgctggagtgtagccagaggaacctgatgacatga
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