Alosa sapidissima (American shad): 121677876
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Entry
121677876 CDS
T11137
Symbol
cltrn
Name
(RefSeq) collectrin
KO
K20004
collectrin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121677876 (cltrn)
Membrane trafficking [BR:
asad04131
]
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121677876 (cltrn)
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Motif
Pfam:
Collectrin
DUF3931
Alpha-amylase_N
Motif
Other DBs
NCBI-GeneID:
121677876
NCBI-ProteinID:
XP_041912893
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Position
12:complement(20280961..20285833)
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AA seq
220 aa
AA seq
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MFSLLLLLLSLPPALALECSKDHQDGYQVRLSIKTALGDQAYDWNESELFLFKATIAFAM
RKYTKNETYDVSNIVVCNETPRVSFWFIVVNPENPTLAITKTRVEEAVRVSRNRINNAFL
LTDKTLEFLGIPPTLATPVTPATPPWLIVFGVVIGAVCAGIVALLISSFVRGKRANKAKE
FAEEDDQAKGADKGISGETFEDRNGVYNQAFSDDDRFTQL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttttctctgctacttctcttactttccctgccacctgccttggccttagaatgcagt
aaggatcatcaggatggttatcaagttagactcagtatcaaaacagcccttggagatcaa
gcatatgactggaatgagagtgagctgttcctcttcaaggccaccattgcctttgccatg
agaaaatacaccaaaaatgaaacatatgatgtttcgaacattgttgtgtgcaacgagaca
ccaagggtttccttttggttcattgtggtaaaccctgaaaaccctacgctagcaatcaca
aagacgagagtggaggaagcagtaagggtgtctcgcaaccgcataaataatgccttcctg
ctaacggacaagacactggagttcttgggcatcccaccaacattggcaacccccgtcaca
cctgccactcccccctggctcattgtgtttggggtggtgattggggcggtctgtgctggc
attgttgctttgctcatatcctcttttgtcagggggaaacgtgcaaacaaggctaaggag
tttgctgaagaggatgatcaagccaaaggagctgataaggggatcagcggcgagacattt
gaggacagaaatggtgtttataaccaggccttctctgatgatgaccgcttcacccagctg
taa
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