Alosa sapidissima (American shad): 121677915
Help
Entry
121677915 CDS
T11137
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03018
RNA degradation
asad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121677915 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
121677915 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121677915 (lsm7)
03041 Spliceosome [BR:
asad03041
]
121677915 (lsm7)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121677915 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
121677915 (lsm7)
Spliceosome [BR:
asad03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121677915 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
121677915
NCBI-ProteinID:
XP_041913001
LinkDB
All DBs
Position
12:complement(25450595..25452870)
Genome browser
AA seq
141 aa
AA seq
DB search
MARKYGLKSASFFRFTKKDSVSTRRTVSGTTSSTNPTSVLDKEKKKKESIFDLSKYIDKP
IRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVV
LICPQDGMEAIPNPFIQQQDG
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggcacggaagtatggactgaagtctgccagtttttttcggttcactaagaaagactct
gtctccacaagaaggactgtgtcaggcaccacatcgtccactaatcccacatcagtcttg
gacaaagagaagaagaagaaggaaagtatattcgacctgtcgaaatacatcgataagcca
atcagagtgaaattccaaggtggacgagaagcaagtggtgtcttgaaaggcttcgaccct
ttgttaaacctcgtattggatggcactatcgaatacatgcgcgaccctgatgaccagtac
aaattgactgaagacactcggcaactgggcttagtggtgtgtcgagggacttctgtggtg
ctcatctgtcctcaggatggcatggaggccattccaaaccctttcattcaacaacaggat
ggctag
DBGET
integrated database retrieval system
