Alosa sapidissima (American shad): 121677983 Help Entry 121677983         CDS       T11137                                  Symbol crocc2 Name (RefSeq) rootletin   KO K16469   rootletin Organism asad  Alosa sapidissima (American shad) Brite KEGG Orthology (KO) [BR:asad00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:asad03037]     121677983 (crocc2) Cilium and associated proteins [BR:asad03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    121677983 (crocc2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rootletin ATG16 FAA_hydro_N_2 Motif Other DBs NCBI-GeneID:  121677983 NCBI-ProteinID:  XP_041913083 LinkDB All DBs Position 12:27373098..27442509 Genome browser AA seq 1795 aa AA seqDB search MNSQGEERPQSPGLEAVIQKLEDSLLDVSAEERALTIWGEELGSTAAPVPVRIRQIVTRN LSDSPAATSMGGAEVSVQEENRALKDLLSQTRADRDQLLVKQAALTDRLEQMLVLQSGDS DQESVSAERRLREEARSYRLKLQSYQESQHRQAQLVQKLQAKVLQYKKRCGELEEQVLQK TSESEKLRLSLQTHLDSSAQRLQRTEQEHGRDLQSKQGLLEEEQKRCSGLSQVNALLRQQ LEQAAAANQGLSESLRRARLDAEHKDTRLRREQETSASRLGREQARVRALWRQAASLRST FTQLRAFTDRNLADMRTECVSTGRQLRAACLSLEVSVSQQSAPSGVEVSVLERQLREKLL EAMQLQARWDAEKVELNSRILELTDMVKHLRGQNSEKESSMASMQSSLDRMELSRAEERE ERDCLLSEVQALQHVLHSISQVARGDGDGATLESSKQEADGRSLALSPLRGVSPQRDGTL LVVQRALTQRHTQVQDLRVRLEAALEQAGTLRAQLQEGELERREMELRGQELQQDSLQMD RALEESRRDAQRFRSSLDIISSEKEGLEQLVSGLREQLDSQRSELEAGRLLLLDTQRQRD LLRQQREDLETQLGRQRAEAERGQRLAEQLEERHSELRKELVGLKETLCQLTLHKEVLED EKASLAQAISKLEAQNAEQEVSITRLQSEEAGLRDSLAKMAALSEGLAKDKVELNRILLQ TEAEKASLDERRREAELERATAREEAGRLQQELRDVEVEQRALGVSEGQLREARGSLEAQ LSLLVKEKNHAQELHVQVSAQRQAMSEQLCAVQRELEAQRGAMERAGRERDELAKDKASL GVQLSTALRKASGLAQELATLRAEKEALETALFEGQELACALEGDCSRLEGERRSLVLAN EALTREEALSSREATERSLGEQLKELNQQREEAQQELSGLRRSLQEAEESRDAGRRDLIE AHRQLRECAGERDAQRQEALELRRALGDAGREKEAVHTSNQELRATVKRAENDNNSLKRS LEEKEQRLSVLEECKSSHQQEASKLRATLRELERSRLQARRELQELRRQVKSLEGEVSSR SKELGELQARVAQEEQREEEARREAFSLRQRLLESEAGREAAIKESSVLQRRVAEQEEAE AAAREAQHQRDAALQESQRRQREETARLEEALREAQAQAREQGLRASLAEGQARGLEEQL AQGEVARRGLEHRLAGLESALRRTLGIGRSGRSPTRGARGRSPSPWRNRSPVKDGEGGPE GLTPSGSPGRSLSPGRGGDEELDLDTLHTALHSFQRELRDTQRDRDEAYTQVLSLTRQVS ELQAAQDKANGRLQQLHKNLRDAEQGRREVTERLEGVQTSLALQEEVSRRGERERRSLGE EVTTLRSSLQAAEAEAQRLQEKLERSEASESRGEVERRQLKEACEHAEARAGRLEVSQRS LEGEVQRGGVRAAELEAEVAGLQERLASLRRELGESEERGALLRLEVERLAACLGRAEQQ DSQLRERLQGATVQLSESSASAGAAQEQAAQLQRALTASEHDRRMLQERLDKMREALSES KKQNHVLTERAQNLQRAQEDSELRAAELDKQARALQEALRQRQEGEQEALEDSRQLQKDK GDLQGRVASLQASLQRLEAEKADLERGMSRLGKGKASLRKTLEKVEHDRRRLEEETLSLS REREHLEQTTHTLQEELTDAHTHTHTLQAQISHLEHSQSQRLLEVTVRHRQELDQETERL RGSQLQTERALEAREKAHRQRVRCLEEQVCTLKEQLEQEMRRRQAYVSQLLRPGA NT seq 5388 nt NT seq  +upstreamnt  +downstreamnt atgaattctcaaggggaagaaaggccgcagtctcctggacttgaggccgtgattcagaag ctagaagactccctcctggatgtcagtgcagaagagagggcactcaccatttggggggaa gaactgggttccaccgctgcaccagtccctgtgcgcatccgacagattgtcaccagaaac ctgagcgactctcccgcagcaaccagcatgggtggagctgaggtttcagtacaggaggag aaccgggccctcaaagacctgctgtcccagactcgagctgaccgtgaccagctgcttgtc aagcaggcggccctcacagacaggctggagcagatgctggtcctgcaatccggtgactca gatcaggagagtgtgagtgcagagcgccggctacgtgaggaggctcgctcctaccgcctc aaactgcagagctaccaggagagccagcacagacaggctcagctggtgcagaagctacag gccaaggtcctgcaatataagaagcgctgtggggagctggaggagcaggttctgcagaag acttccgagtcagagaaactgcgcctgtctctacagacccacctggactcctctgcccag cggctccagcgcaccgaacaggagcacggacgcgacctccagagcaagcagggcctactg gaggaagaacagaaaaggtgctcgggcctgagccaggtgaacgcgctgctccgccagcag ctggagcaggcggccgccgccaaccagggcctgagcgagagcctgcgccgggcccgcctg gacgccgagcacaaggacacgcgactacgcagggagcaggagacgagtgcctccagactg ggccgtgagcaggcgcgtgtgcgggcgctgtggcgccaggccgcctccctccgcagcacc ttcacccagctcagggccttcactgacaggaacctcgctgacatgcggacagagtgtgtt agcaccgggcgccagctgcgagctgcctgcctgagcctggaggtgagcgtgagtcagcag agcgccccctctggtgtggaggtgtcggtgctggagaggcagctccgggagaagttgctg gaggccatgcagctgcaggcgcgctgggacgccgagaaggtggagctcaactccaggatc ctagagctgacagacatggtgaagcatctaaggggacagaacagtgagaaagagtccagc atggcctctatgcagtctagtctggaccgaatggagttgagtcgggctgaggagcgtgag gagagggactgtctgctgagtgaggtccaggccctgcagcacgttctacacagcatcagc caggtggcgcgtggggatggcgatggcgccacgttggagagctctaaacaggaagcagac ggccgctctctcgccctgtctcccctgcgaggcgtctccccccagagggacggcacgctg ctggtggtccagagggccctgacccagcggcacactcaagttcaggacctgcgtgtgcgt ctggaggcagcgctggagcaggcgggcaccctgcgggcgcagctgcaggagggtgagctg gagcgacgcgagatggagctcaggggccaggagctgcagcaggacagcctgcagatggac agggccttggaggagagccggcgggacgcccagaggttccgcagctcactggacatcatc agcagtgagaaggagggtttggagcagctggtctctgggttgcgggagcagctggactcc cagcggtccgagctggaggcggggcgcctgctgctgctggacacacagaggcaacgggac ctgctcaggcagcagagggaggacctggagacgcaactgggccgccagcgcgccgaggca gagagaggccagaggctggcggagcagctggaggagaggcactcggagctgcggaaggag ctggtgggcctgaaggagacgctgtgccagctcaccctgcacaaggaggtgctggaggac gagaaggccagcctagctcaggccatcagtaagttggaagcccaaaatgctgagcaggaa gtgtcgatcaccagactgcaaagtgaggaggcagggctgcgtgactccctggccaagatg gccgccctgagtgaaggcctagccaaagacaaagtggagctcaatcgcattctactgcag acggaagcagagaaggcatccctggacgagcgtcggcgggaggcggagctcgagcgggcg acggctcgtgaggaggcggggcgtctgcagcaggagctccgggatgtggaggtggagcag cgagcactgggggtgtcagaggggcagctgcgggaggcccggggcagtctggaggcccaa ctcagcctgctggtcaaggagaagaaccacgcacaggagctgcacgtacaggtgagtgct cagcggcaggccatgtcggagcagctgtgtgcggtgcagagggagctggaggcccagaga ggagccatggagcgggcaggccgcgaaagagacgagctggccaaggacaaggccagcctg ggggtccagctcagcacagcactgcgcaaagcctctggcctcgcccaggagctggccacc ctcagggctgagaaggaggccctggagacagctctgtttgagggtcaggagctggcctgt gctctggaaggtgactgcagtcgcctggagggagagcggcgcagtctggtgctggccaac gaggccctgacccgtgaggaggcgttgagctcacgcgaggccactgagaggagtctggga gagcagctgaaggagctcaaccagcagagggaggaggcgcagcaggagttgtctgggttg aggcgctctctgcaggaggcggaggagtcccgtgacgcggggcgaagggatctgatcgag gcccatcggcagctgcgggaatgcgccggtgagagggacgcccagcggcaggaggccctg gagctccgaagggcgctgggcgacgcaggccgcgagaaggaggccgtccacacctccaac caggagctgcgtgccacggtgaagagggccgagaacgacaacaacagtctgaagcggtcg ctggaggagaaggagcagaggctgtccgtgctggaggagtgtaagtcctcccaccagcag gaggcgagcaagctaagggccacgctgcgcgagctggagcgctcccgtctgcaggcgcgc cgggagctgcaggagctgcgcagacaggtgaagagcctggagggggaggtgtcgagtcgg agcaaggagctgggggagctgcaagcgcgcgtggcccaggaggagcagcgtgaggaggag gctcgcagggaggccttcagcctccgacagaggctcctggagagcgaggccggccgagag gcagccatcaaggagtcctcagtgctgcagcggcgagttgctgagcaggaggaggcggag gcggccgccagggaagcgcagcaccagcgcgacgccgccctccaggagagccagcggcgg cagcgcgaggagacggcccgtctggaggaggccctgcgggaggcccaggcccaggcccgg gagcagggcctgagggccagcctggccgaggggcaggccaggggcctggaagagcaactg gcccagggggaagttgcccgccgtgggctggagcacaggctggccggcctggagtcggcc ctgaggaggacgctggggatcgggcgctccgggcggtcacccacccggggggccagaggg cggagcccctctccttggagaaatcgctctcctgtgaaagacggtgagggtgggccggag ggactgacacccagtggctctccgggccgctctctgtcccctggccgtgggggggacgag gagctggacctggacactctgcacacggccctgcacagcttccagcgggagctcagggac acgcagagggacagggatgaggcctatacacaggtgctgagtttgactcgtcaggtgagt gagctccaagcagctcaggacaaagccaatggcagactacagcagctccacaaaaacctg agagatgcagagcaggggaggcgcgaggtgactgagaggctggagggggtgcagacatcc ctggctctccaggaggaggtgagccggcgtggggagagagagaggaggagtctgggagag gaagtgaccacgctgaggagcagcctgcaggcagcggaggccgaggcccagagactacag gagaagctggagcgcagcgaggcgtccgagtcccgtggggaggtggagcggcggcagctg aaggaggcgtgcgagcatgcggaggcgcgggccggccgcctggaggtgtcccagcgctcc ctggagggcgaggtgcagaggggaggcgtgcgcgcggccgagctagaggccgaggtggcc ggcctgcaggagcgcctggccagcctgcgcagggagctgggggaaagcgaggagaggggc gccctgctcaggctggaggtggagcgtctggcggcgtgtctgggtcgggcggagcagcag gactcccagctgcgggagaggctgcagggcgcgacggtccagctgagcgagagcagcgcc agtgccggagccgcccaggagcaggccgcccagctgcagagggcgctgaccgccagcgag cacgaccgccgcatgctgcaggagaggctggataagatgcgtgaggcgttgtccgagagc aagaagcagaaccacgtgctgacggagcgtgcccagaacctccagagagcccaggaggac agtgagctgcgtgcggcagagctggacaagcaggcgcgggcactgcaggaggccctgaga cagaggcaggagggggagcaggaggccctggaggactccaggcagcttcagaaagacaag ggggacctccagggacgcgtggctagcctgcaggcctcgctccagaggctggaggccgag aaggccgacctggagagagggatgagccgcctgggcaaaggcaaggcctcgctgaggaag accctggagaaggtggaacatgacaggaggcggctggaggaggagactctgtctttgagc cgtgagagggagcatctggagcagaccacacacaccctgcaggaggagctcactgatgcc cacacacacactcacacactacaggctcagatttcgcacctggagcactcgcagtcccag agactgctggaggtgacggtgcggcaccgtcaggagctggaccaggagacggagcgcctg cgcgggtcccagctgcagaccgagcgggcactggaggcccgagagaaggcccaccgccag agagtccgctgcctggaggaacaggtgtgcacactgaaggagcagctggagcaggagatg cggaggcggcaggcctacgttagccagctgttgagacctggggcctga

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