Alosa sapidissima (American shad): 121677988
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Entry
121677988 CDS
T11137
Symbol
sema6bb
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-6B
KO
K06842
semaphorin 6
Organism
asad Alosa sapidissima (American shad)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
121677988
NCBI-ProteinID:
XP_041913086
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Position
12:complement(30523496..30640427)
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AA seq
904 aa
AA seq
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MVTAMTTLSPPLLLLPMLLMCGLLHLASTAFPEEPGPLNSIPSEVVRRHPVFLGRAHRSS
LRLEPLHIQRILKVNRTLYIGARDDLFRVELDNVMGDEMFYSKKRTWESNKNDIRVCRMK
GKHEDECRNFIRVLLSRQDGLFVCGTNAFNPLCANYTGDTLEMLGDPVSGMARCPYDPKH
ANVAIFAEGNLFTATVTDFLAIDAVIYRSLGDSPALRTVKHDSKWFREPYFISAVEWGPH
IYFFFREIAMEFNYLEKVMVSRVARVCKRDLGGSQRVLEKQGTSFLKARLNCSVPGDSHF
YFNMLHSTSPVIRMHGRDXILGVFSTPSNSIPGSAVCAFDMEQLAGVFDGRFKEQKSPES
IWTPFPDELLPKPRPGGCAGPGSKYNSSNSFPDEMLTFVKTHPLMDEAVPSLGQRPWIVR
TMVRYQLNKMVVDTEAGPYRNRTVLFLGSSRGTILKFLILPNSDNTVTSGNILLEELEGF
NADKCGEDSPQARQLLSLILDRPSHTLLLAFPSCVVRVPVARCQLYSRCMKNCIASRDPY
CGWTRGSTCSFLRPGTRIPFEQDVEQGNTSHLGDCDGLLQESFIEEPDGLVSLNLLVVSA
VSAFSTGAVLSGLMVCWIMSHKHRQCQRRAGSGRQRGKGDKEQSMLGQGRSGSVMSVTRG
SGDRPRSQLENPFAVHNGLPTPEQTPQQQKRPSPNVHLSELDWEQGQPVLTTVGTPCPPG
STAVIFQRHKYPQGGGGGIGRHGGDDMGPDMVAQRPGERECFLILSHRDAPQGRQQPASV
TRNSAGEYYPSTPQESPDRRRVVSAPNTQGEYGEPRWTHDGLNFSNSNNAAPAGHRLHYA
LQQTQQQQQQQQQQTTTQSQRPSSAIVRGSHHHHHHPPRGLGELSDFSHLLGGKGVGERT
PNGQ
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggttacggcgatgacgacccttagtccacccctgctgctgctgccgatgctgctgatg
tgtgggctcctgcatctggccagcaccgcattccccgaggagcctggacccttgaactcc
ataccctctgaagtggtgcgacggcatcctgtttttttgggtcgagctcatcgctcttcg
ctgaggctggagccgctgcatattcagaggatcctgaaggtcaacaggacgctctacatc
ggagccagggatgacttgttccgtgtggaactggataacgtgatgggggacgagatgttc
tacagcaagaagagaacctgggagtccaataaaaatgacatacgagtgtgcagaatgaag
ggcaagcatgaggacgagtgccggaatttcatcagagtgctgctgagccgtcaggacggg
ctgtttgtgtgtgggaccaacgccttcaacccgctgtgtgccaactacaccggcgatacc
ctggagatgctgggcgaccccgtcagtgggatggcacggtgcccgtacgacccaaaacat
gccaacgtggccatcttcgcagaggggaatctgttcactgccaccgtcaccgacttcctg
gccattgacgcggtgatttatcgcagcctgggggacagcccggctctgcgcaccgtcaaa
cacgactccaagtggttccgagagccatacttcatcagtgcagtggaatggggccctcac
atctatttcttcttccgagaaatcgccatggagttcaactacctggagaaagtgatggtg
tcccgcgtggcccgtgtgtgtaagcgtgacctgggcggttctcagcgtgtcctggagaag
cagggaacgtcgtttctgaaggcgcggctcaactgctccgtgccgggagactcacacttc
tactttaacatgctgcactccaccagccctgtcatcaggatgcacggacgagacntcatc
ctcggggtcttctccacaccatcaaacagtattccgggttcggcagtgtgtgctttcgac
atggagcagctggccggagtgttcgacggccgcttcaaggagcagaagtccccggaatcc
atctggaccccctttcccgacgagctcctccctaaacccaggcctggaggctgcgctggc
cccggctccaagtacaactcgtccaactccttcccggatgagatgctgaccttcgtcaag
acccaccccctgatggatgaggccgtgccctcgctaggtcagaggccctggatcgtgagg
accatggtcaggtaccagctgaataagatggtggtggacactgaggccgggccctaccgg
aatcgcaccgttctcttcttgggttccagccgcggaaccatcctcaagttcctcatctta
ccgaactccgacaacacagtgaccagcggaaacatcctcctggaggaactggagggcttc
aacgccgacaagtgtggagaggactctccccaggcacggcagctgctgtctctgatcctg
gaccgtccgagccacaccctgctgctggccttcccctcctgtgtggtgagggtgcccgtg
gcccgatgccagctctactcacgctgcatgaagaactgcatcgcctcgcgagacccctac
tgcggctggacccgaggcagcacctgctccttcctgcgacccggaacgaggataccgttt
gagcaagacgtggaacaggggaacacatcccacctgggggactgtgacggtcttctacag
gagagcttcatagaggagcccgacggtctggtgtccctgaacctgctggtggtgtctgca
gtttcggccttctccaccggggcggtgctgtcgggcctgatggtgtgctggatcatgagc
cacaagcaccggcagtgccagcgtcgggccggctcgggtcgccagcggggcaaaggggac
aaggagcagagcatgctgggccagggccgcagcgggtcagtgatgagcgtgacgcggggc
agcggcgaccggccgcgctcgcagctggagaaccccttcgccgtgcacaacgggctgccc
acacccgagcagacgccgcagcagcagaagcggccgtcccccaacgtgcacctgtccgag
ctggactgggagcagggccagccggtgctgaccaccgtgggcaccccctgcccccccggc
agcacggcggtcatcttccagagacacaagtacccgcagggcggcggcggaggcatcggg
cggcacggcggagacgacatgggccccgacatggtggcacagaggcccggcgagcgcgag
tgcttcctcatcctcagccacagggacgcgccgcagggccggcagcagccggcctccgtc
acacgcaactcggcgggcgagtactacccgtccacgccccaggagtcgcctgaccgccgg
cgggtggtgtcggcgcccaacacgcagggcgaatacggcgagccgcgctggacccacgac
gggctcaacttcagcaacagcaacaacgctgcccccgcaggccaccggctgcactacgcc
ctccagcagacgcagcagcagcagcagcagcagcagcagcagacaacaacgcagtcccag
cgcccctcctccgccatcgtgagggggtcccaccatcaccaccatcaccccccacgaggg
ctgggggagctgtccgacttcagccacctgctgggggggaagggcgttggggaacgcacc
cccaacggccagtga
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