Alosa sapidissima (American shad): 121678171
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Entry
121678171 CDS
T11137
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121678171 (gabra5)
04082 Neuroactive ligand signaling
121678171 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121678171 (gabra5)
Ion channels [BR:
asad04040
]
Ligand-gated channels
GABA-A
121678171 (gabra5)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
121678171
NCBI-ProteinID:
XP_041913391
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Position
12:complement(22045311..22079925)
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AA seq
465 aa
AA seq
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MGNGIRCSSKMRSLWIGVVLGCLLCRLSFSQTATTATPKEAELNDNITIFTRILDGLLDG
YDNRLRPGLGEMVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMDILP
LNNLLASNIWTPDTFFLNGKKSVAHNMTTPNKLLRLKEDGTLLYTMRLTIAAECPMQLED
FPMDAHACPLKFGSYAYPVSEVVYQWTEDAAKSVVVAEDGSRLNQYHLIGQTAGSEEIST
SRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLT
MTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAMEA
QQPKRKDPLALSKKPNNACAAGVNYTPNITKDTAISTISNSTAVQLKSGEAKAPAIDPKK
TYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAESPT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatggaatacgttgcagctccaaaatgagaagtctatggatcggtgtcgtgctt
gggtgtctcctatgccgtttgagtttttctcagacagcaacaacagcaacacccaaggaa
gcagagctgaatgataacattactatattcacccgaatattagatgggttactggatggc
tacgacaacagactccgtcctgggctgggagagatggtgaccgagatcaagacaaatatt
tttgtcacaagctttggtccagtgtcggacacagagatggagtacactattgatgtgttt
ttccgccaaagctggaaggatgagcgtttgcgtttcaaaggaccaatggacattctgcct
ctcaacaacctgctggctagcaacatctggacacccgacactttcttcctgaatggcaag
aagtctgttgcccacaacatgaccacccccaacaagctgctacgcttaaaagaggatggc
accttgctctacaccatgaggttgaccatagcagctgagtgccccatgcagctggaggat
tttcctatggatgcccatgcctgtccactcaagtttggaagctatgcctacccggtgtca
gaagttgtttaccagtggacagaagacgcagccaagtctgtggtcgttgcggaggacggc
tcgcggctcaaccagtaccacctgatcggacagacggctggctcagaggagatctccacc
agccgaggtcaatacacagtaatgatggctcatttctacctgaaacggaagatcggctac
tttgtgattcagacctacatgccttgcttcatgaccgtcatcctgtcccaggtgtctttt
tggctgaaccgggagtctgtgcctgccagaaccgtctttggtgtgacaacggtgctgacg
atgaccacacttagcatcagtgcccgcaactcgctgcccaaagtggcctacgccactgcc
atggactggttcatcgccgtgtgctacgcctttgtcttctccgcgctcatcgagttcgcc
accgtcaactacttcaccaagcggagctgggcgtgggatggcaagaaggctatggaggca
caacagcctaagagaaaggatcccttggcactctccaagaagcccaacaatgcgtgcgca
gccggtgtgaactacacgcccaacatcaccaaggatacggccatctcgactatctccaac
agcacggccgtgcagctgaaaagcggcgaggccaaggcgccggccattgatccgaaaaag
acttacaatagcgtcagcaagatcgacaagatgtccaggatagtgtttccggtccttttt
ggaacgttcaacctggtctactgggccacttacctgaacagggagccggttatcaaaggg
gcagagtcccctacataa
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