Alosa sapidissima (American shad): 121678179
Help
Entry
121678179 CDS
T11137
Symbol
nlgn1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121678179 (nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121678179 (nlgn1)
Membrane trafficking [BR:
asad04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
121678179 (nlgn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
BD-FAE
Abhydrolase_3
Motif
Other DBs
NCBI-GeneID:
121678179
NCBI-ProteinID:
XP_041913401
LinkDB
All DBs
Position
12:complement(5772694..5975894)
Genome browser
AA seq
861 aa
AA seq
DB search
MLPQRPCRLRSVCSAMRPRMGFGSGADPALLLWVLGFALQALLVAAQKLDETDPVVTTAY
GRVRGFKKELNNEILGPVIQFLGVPYAAPPTGERRFQPPEPPIPWSDIRNATQFGPVCPQ
NILEGRLPDVMLPVWFTNSLEVVSSYVQDQSEDCLFLNIYVPTEDVKRISKECARKPGKK
ICRKGGPLTKKQSDDLGDNDGAEDEDIRESGSPKPVMVFIHGGSYMEGTGNMFDGSILAS
YGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIAFFGGDPLRITVFG
SGAGASCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGSALSSWAVSFQPAKYARMLAKK
VGCNLKDTVDLVECLQRKHYKELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFL
NYDIMLGVNQGEGLKFVELIVDNENGVQANDFDYAVSSFVDDLYGYPEGKDILRETIKFM
YTDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSSFGSPTYFYAFYHHCQTEQVPP
WADAAHGDEIPYVFGLPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQD
TKFIHTKPNRFEEVAWSRYNQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHSLNEV
TQIISTTTKVPPPEVTPRTPKKIPVNTKRPNPTPFPTESQDSQPFQVDQRDYSTELSVTI
AVGASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRNTANDLAHTQEEEIMSLQMKHTDL
DHECDAMHPHEVVLRTACPPDYTLAMRRSPDDIPLMTPNTITMIPNTMPGLTSLHSFNTF
SSGQNNTLPHPHPHSHSTTRV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgttgccacagcgaccctgccgactacggagcgtgtgtagtgccatgaggcctcggatg
ggatttggctcgggtgcggacccagccttgctgctgtgggtgttgggcttcgctctgcag
gccctgctggtggccgcacagaaactggacgagacggacccggtggtgaccaccgcctac
gggcgggtgcggggcttcaagaaggagctcaacaacgagatcctcggccccgtcatccag
ttcttgggcgtgccctacgccgcacctcccacgggcgagaggcgcttccagccccctgag
cccccgatcccgtggtccgacatccggaacgccacccagtttggccccgtgtgcccccag
aacattctggaaggcaggctccccgatgtcatgctccctgtgtggtttaccaacagcctg
gaggtggtctcctcctacgttcaggatcagagcgaggactgcctgttcttgaacatttat
gtgcccacggaggatgtaaaaagaatatccaaggaatgtgccaggaaacccggcaagaaa
atatgtagaaaaggaggtccccttacaaagaaacagagtgatgatttaggtgataatgac
ggtgcagaggacgaagacattcgtgaaagtggcagtcccaagccagtgatggttttcatc
cacggaggttcttatatggagggcacagggaatatgtttgacgggagcatcttggcaagc
tatggcaatgtcattgtcataactgtgaactatcggcttggagtgctaggttttttgagc
acaggagaccaagctgcaaagggaaattatggccttttggatctaatccaagccctacgc
tggaccagtgaaaacattgctttttttgggggtgaccctttgcgcattactgtatttgga
tcaggggctggcgcttcatgcgtcaacctcctgactctatcccattattctgaaggtaac
cgttggagcaattcaaccaaaggactttttcagagagctatagcacagagcggttcagcc
ttgtccagctgggcggtcagcttccagcctgctaaatatgcccgtatgctggccaagaag
gtgggctgcaacctgaaggacactgtggacttggtagagtgcttgcagaggaagcactat
aaagagctagtggaccaagacattcagcctgctcgctaccacatagcatttggacctgtt
atcgatggggacgtcattccagatgatccacagatccttatggagcagggtgagttcctc
aactatgacatcatgctgggggtcaaccaaggtgaaggtctgaagtttgtggagctcatc
gtggacaacgagaatggtgtgcaggcaaacgactttgactatgccgtttccagtttcgtt
gatgacctctatggttatccggagggcaaggacatcctgcgagagacaattaagttcatg
tacacagactgggcagacagacacaacccggaaacgcggagaaagacattacttgcgttg
tttactgaccaccagtgggtggccccagctgtggccacggcggatctccactcaagtttc
gggtctcccacttacttctacgccttctaccatcactgccagacagagcaggtgccgccc
tgggcagacgcagcccatggcgatgaaatcccatatgtgttcggcctgcccatgattgga
ccaactgagctcttcccatgcaacttctcaaagaatgatgttatgctgagcgctgtggta
atgacgtattggacaaactttgctaaaactggagaccccaaccagcccgttccccaagac
accaagttcatccacaccaaacccaatcgctttgaggaggtggcctggtcacggtacaac
cagaaggaccagctgtaccttcacatcggcctgaagccccgggtcaaggagcactaccgt
gccaataaggtcaacctgtggctggagctggttcctcacctacacagcctgaacgaggtc
acacagattatctccacgaccaccaaggtcccaccgccagaggtcactccgcgaacacca
aagaagatccctgtcaacaccaagaggccgaaccccacgccgttccccaccgagagccag
gacagccagcccttccaggtggaccagcgcgactactccacggagctgagcgtgacgatc
gcggtgggcgcgtcgctgctcttcctcaacatcctggccttcgccgcgctctactacaag
aaggacaagcggcggcacgacgtgcaccgacgctgcagcccgcagcgcaacacggccaat
gacctggcgcacacgcaggaggaggagatcatgtcgctgcagatgaagcacacagacttg
gatcacgagtgtgacgccatgcatccgcacgaggtggttctgagaactgcctgcccgccc
gactacacgctagccatgcgacggtcgccagacgacataccactcatgacgccaaacacc
atcaccatgatccccaacaccatgccagggctcacttccctccactccttcaacaccttc
tcaagcggacagaacaacacgctgcctcacccccatccacactcacactccacgaccagg
gtatag
DBGET
integrated database retrieval system
