Alosa sapidissima (American shad): 121678183
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Entry
121678183 CDS
T11137
Symbol
si:ch211-247n2.1
Name
(RefSeq) calcium-activated potassium channel subunit beta-2 isoform X1
KO
K04938
potassium large conductance calcium-activated channel subfamily M beta member 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
121678183 (si:ch211-247n2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121678183 (si:ch211-247n2.1)
Ion channels [BR:
asad04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121678183 (si:ch211-247n2.1)
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Motif
Pfam:
CaKB
KcnmB2_inactiv
DUF3592
Motif
Other DBs
NCBI-GeneID:
121678183
NCBI-ProteinID:
XP_041913410
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Position
12:complement(5214060..5234066)
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AA seq
337 aa
AA seq
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MAQWALLPPNKWAAASLWKGKEKPLRQTCSPRHEMYSTHMRDTWRQGNFQQHQQPYLKPS
LSHSHSGAAGRMFLWAGAKGGAQRTGHEGRTIYQKIREHDILDKRKTVTALKAGEDRAIL
LGLSMILFSVMMYFVLGITMVRSYSDSVWTEESSCTVLNSTVVAEINCTYSCGSECWKSS
RYPCLQVFVSLNTSGRVLRLSYNEEAQDSNPECFYVPKCRKDHTTMHSMVLNISERLKMH
QQVPCYYDPGEQQDSVLLTRLYGRGAVFHSLFWPTCMFVGGTLIIAMVKLTQYLSILCEQ
ISRIKRLGLSLFEAARHRERVASVSRQRRSTPVLDTV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtgggcactgctccctccaaacaaatgggctgctgcttccttgtggaaagga
aaggaaaaacccctgcgccagacatgctccccgagacacgagatgtacagcacacacatg
cgagacacgtggagacaggggaacttccagcagcaccagcagccttatctgaagccttca
ctgagccatagccactctggagcagcagggaggatgttcctatgggctggagccaaaggc
ggcgctcaaagaacaggacatgagggaaggacaatataccaaaagatccgtgagcatgac
atcttggacaagaggaagacggtgacggctctgaaggcaggagaggaccgagccattctg
ctgggcctgagcatgatcctattctccgtcatgatgtactttgtcttgggcattactatg
gtgcgctcctactcagacagcgtgtggacggaggagtccagctgcactgtgctcaactct
actgtcgtggccgagattaactgcacctacagctgcggctccgagtgctggaagagttcc
aggtatccatgcttacaggtgttcgtcagtctcaacacatccggccgagtgctccggctc
tcctacaacgaggaggcacaggactccaaccccgagtgtttctatgttcccaagtgccgc
aaggatcacactaccatgcactcaatggtcctgaacatctctgagagactgaagatgcac
cagcaggtgccttgctactacgacccaggcgagcagcaggactccgtgctgctgaccaga
ctctacggccgcggcgccgtcttccactccctcttctggcccacgtgcatgttcgtcggg
ggcacgctcatcatcgccatggtgaaactcacacagtacctgtccattctgtgtgagcaa
atcagtcggattaaaaggcttggtctctccctcttcgaggctgcacgccacagagagaga
gttgcttccgtttccaggcagagacgcagtacaccggtcctggatacagtgtga
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