Alosa sapidissima (American shad): 121678274
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Entry
121678274 CDS
T11137
Symbol
orc1
Name
(RefSeq) origin recognition complex subunit 1 isoform X1
KO
K02603
origin recognition complex subunit 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121678274 (orc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asad03032
]
121678274 (orc1)
03036 Chromosome and associated proteins [BR:
asad03036
]
121678274 (orc1)
DNA replication proteins [BR:
asad03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
121678274 (orc1)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
121678274 (orc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_Cdc6
BAH
AAA
AAA_16
AAA_22
AAA_lid_10
Cdc6-ORC-like_ATPase_lid
AAA_19
NPHP3_N
TniB
Cdc6_lid
SLFN-g3_helicase
PIF1
AAA_11
NACHT
AAA_30
Motif
Other DBs
NCBI-GeneID:
121678274
NCBI-ProteinID:
XP_041913597
LinkDB
All DBs
Position
12:22699274..22715595
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AA seq
943 aa
AA seq
DB search
MSRYSTRLRVKRSYKWKSGPISTDRKLNTHFYESLIIQVEGKPAETIVTLGQYILIEGDD
DDNPYVAQVLKLFSDEDGKVKKAKVQWYIRYCELPHNKRKLLGRSAHAQEVFYYNDSSCD
SEVDAETILGTVEVKHIPGELPFPDNASKDTLFVKLSWDTKAFKSFDPDLMNPFQIAMTP
PPKQMLQSPMQKSPTLTPPITPKARSTTPRMLPTPDPMVMKWASSAASQTPYNRGCMSTG
RRSSREAESIHSASKLSASKLLSGKRRGRIAFEPAIRKKLELSSPGKKMTREDVLGELLD
DDLAQKLTTSPPRSLKLTIRLTPLSVKQPSSKDEEEEDDDISLQPLSQSPDKPTPTAVDE
QDSTSLGVCPLEDSADEGVTVLPTPLQRRATPRRGSLRRQSRTPSQRKSSSDLLREPSLS
VLAEEEHEDSPFQTAVTPRSRRKCAQLVSSRIRKQLGVGDCDAMSLDDEDGDDDAFVPSK
IDLHSSSDEDVDAKVESDDELVIITRKSRKMTGSHTPQATEKTRPSTRTPRKTPSKKTAP
TTPRTPKTPRHATPVIPSRNQPARTPGNVLEVARARLHVSSVPESLPCREQEFQDIYNFV
ESKVIDGTGGCMYISGVPGTGKTATVHEVIRSLQQAADLDEIPQFRFIEINGMKMTDPHQ
AYVQILQKLTNQKVTPDHAASLLEKRFSNPAPKKETTVLLVDELDLLWTRKQNVMYNLFD
WPTRRHARLVVLTIANTMDLPERIMINRVASRLGLTRMSFQPYTFKQLQQIIASRLNRVR
AFEEDSLQLVSRKVAALSGDARRCLDICRRATEICEFSANPKSGTGLVGMSHVMQALDEM
FSSAYITAIRCASVQEQLFLRAVIAEFRRLGLEEATFQQVFVQHQALCRVEGLQPVSVSE
SQAVCQRLGACRLLLLEPSRLDLLLRVRLNVSQDDVLYALKAD
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcagatattccacacggctacgagtgaagaggagctacaaatggaaaagtggaccc
atcagtactgataggaaattgaacacacacttttatgaatcgttgattattcaagtggaa
gggaaacctgcagagaccattgtcactttaggccagtacattctcattgaaggtgacgat
gacgacaacccatatgtcgctcaggtcctgaagttgttcagtgatgaggatggcaaggtg
aagaaggcaaaagtgcagtggtacatacgctactgtgagttacctcataacaagagaaag
ctgcttggcagatctgcacatgctcaggaggtcttttactataatgactcctcatgtgac
agtgaggtggatgcggagaccattttgggcacagttgaggtgaagcatattccgggagag
ctccctttccctgacaatgcaagtaaagacactctctttgtcaagctgtcttgggacacc
aaggccttcaaatcgttcgacccagatctcatgaatccattccagattgccatgactcct
ccaccaaagcagatgctccagtcacccatgcagaagagtcccacgttaactccacccatc
acccccaaagctcggagcaccactccacgcatgctgcccacaccagaccccatggtgatg
aagtgggccagctccgccgcgagccaaactccctacaaccgcggctgcatgagcacggga
cggaggagcagccgcgaggccgagtccattcattcggcctccaaattgtcggcctccaag
ctgctgagcgggaagaggcgcgggcggatcgccttcgagccagcaatccgcaagaagctg
gagctcagcagtccaggtaagaagatgaccagggaagacgtgctgggagagctccttgat
gatgatctggcccagaagctcaccacctctcctccacgttctttgaagctcaccatacgc
ctgactcccctcagtgtcaaacagccgtcctccaaagacgaggaggaggaggatgacgac
atctcccttcagcctcttagccagagtccagataagcccacacctactgctgtggacgag
caggattcaacaagtctaggggtatgtcccctggaggattctgctgatgagggagtgacc
gtgcttccaacccccctacagagaagggctactcccaggagaggcagtctgaggaggcag
tcaaggaccccctcgcagaggaagagttcctctgatctcctgcgggagccgtcactgtcc
gtgctggcggaggaggaacatgaggactctcctttccagactgcagtcaccccacgctcc
aggaggaagtgtgcccagctggtgtcctcgcgaatcaggaaacaacttggtgttggtgat
tgtgatgccatgagcttagacgatgaggatggcgatgacgatgccttcgttccatctaaa
atcgaccttcatagcagcagcgatgaggacgtggacgcaaaagtggagagtgacgatgag
cttgtgattataactcgcaagagccgaaaaatgactgggtctcacaccccgcaggccaca
gaaaaaacgcgtccctctaccaggaccccacgcaagactcccagcaaaaagactgctccc
actacccctcggacaccgaaaacacctcgtcatgcaacgcccgtcatccccagccggaat
cagcctgccagaactccagggaatgtcttggaagtagcacgcgcaaggctgcacgtgtct
tcagtccctgaatctctgccttgtcgggagcaagagttccaggacatctataactttgtg
gagagcaaggtcatcgatggcactggagggtgcatgtacatttctggagtgccaggcacc
gggaagacggccactgtacatgaggtgatccgctcgctgcagcaggcagcggatctggac
gagatcccacagttccgtttcattgagatcaatggcatgaagatgactgacccgcaccaa
gcctatgtccagattctacagaaactcaccaatcagaaggtcaccccagaccatgcagcc
agtcttttagagaaacgcttcagtaatcctgctcccaagaaagagactactgtcctactg
gttgatgagctggacttgttgtggaccaggaagcagaatgtgatgtacaacctgtttgat
tggccgacacgtcgccatgcccgtttggtagtcctgaccattgccaacaccatggatctt
ccagaaagaatcatgatcaaccgtgtggccagtcgcctgggcctcactcggatgtcgttc
cagccctacacctttaagcagctgcagcagatcattgcctccagactgaacagggtgcgg
gcatttgaagaggattccctccagctggtgtccagaaaggtggcagcgttgtcaggtgat
gcccgacgctgcttggatatctgccgccgggccacagaaatctgtgaattctcggccaat
cccaagagcggcacgggattggttggaatgagtcatgtgatgcaagcattggatgaaatg
ttctcatccgcctacataactgccatcaggtgtgcatccgttcaagagcagctcttcctt
agggccgtgatcgcagagttccgacgcctcggtttggaggaggctacgttccaacaggtt
tttgtgcagcaccaggctctgtgccgcgtggaggggctgcagccagtcagcgtgtccgag
tcgcaggcagtgtgccaacgtctgggcgcgtgccgcctcctgctcctggagcccagtcgg
ctggacctgctgctgcgcgttcgcctcaacgtcagccaggacgacgtgctctacgccctc
aaggccgactga
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