Alosa sapidissima (American shad): 121678282
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Entry
121678282 CDS
T11137
Symbol
cnga3a
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha isoform X1
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121678282 (cnga3a)
Ion channels [BR:
asad04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121678282 (cnga3a)
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
RR_TM4-6
PFF1_TM
Zip
Motif
Other DBs
NCBI-GeneID:
121678282
NCBI-ProteinID:
XP_041913622
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All DBs
Position
12
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AA seq
742 aa
AA seq
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MAKICTKKSYPTNQRFPVANSDDESGNSRSRAHSACEDMSSAVQDATSTATSRLPGSRRS
SFTGTGAMARLSHFLLLLRNWAARRLRGEEERPDSFLERFRGPELKDLTSRGSNAQSSLG
QSDGPRKRNNPEHWPLATYNMNNCNNTDDKKDDKKDEIKKDEKKEDEKKDGDKKEEEKKD
EKKDDKKEEKKDEKKDDKKDDKKAEEPKKEIWIMDPATDLYYRWLTVIALPVFYNLIMLV
TRSAFDELQENYTILWIVLDYTSDLIYYVDWFVKARTAFLEQGLLVKDSKKLRDNYIAKP
IFKYDMLAMFPTDFLFFKYGYNNPMFRFNRLFKMSRLLEFFERTETRTSFPNVFRISNLV
LYILIIIHWNGCLFFSISKSIGFGTDTWVYPNASHPEYGRLARKYIYCLYWSTLTLTCIG
EVPPPVSDFEYLFVVGDFLVGVLIFASIVGNVGAMVLNMNASRTDFQTKVDSIKQYMSSR
QVSKDLEARVIKWFDYLWTENKTCDEKAVLKHLPDKLKAEIAVNVHLDTVKKVRIFQDCE
AALLIELVLKLQPQVFSPGDYICKKGDIGREMYIIQDGKLAVVADDGITQFVVLGEGAYF
GEISILGIKGSKAGNRRTANIRSVGYSDLFALSKDDLMESLTEYPEAKKALEEKGKAILM
KDNLIDEAIANAGADPMILYDKIMNLQQNVDKTTTLFARMMAEQVSTQTKLKDRIKTMEA
QVKSLSKEEEVVEDKKEEPPKK
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatctgcactaaaaagtcctacccaaccaatcagaggtttccagttgccaac
tctgacgatgaatcaggcaatagtcgcagcagagcacactcggcctgtgaggacatgtcc
tcggcagtacaagatgccacctccactgcaacaagcagactccctgggtcacgccggagt
tcattcacaggcacaggagccatggccaggctctctcacttcctgctcttgctacggaac
tgggcagctcgcaggcttcgcggtgaggaagagcggcccgactccttcctggagcgcttc
cgcggccccgagcttaaggacctgaccagccgcggcagtaacgcccagtcctccctgggt
cagtcagatggacccaggaagaggaataatcccgagcattggcccctggccacttacaac
atgaacaactgcaacaacacagacgacaaaaaagatgacaaaaaggacgagataaagaaa
gatgagaaaaaagaggatgagaaaaaagacggggacaagaaggaggaggagaaaaaagat
gagaagaaagatgacaaaaaggaggagaaaaaagatgagaagaaagatgacaaaaaggat
gataaaaaggcagaggagccaaagaaggaaatctggatcatggatccagcaacagaccta
tactacaggtggctcacagtcattgccttgccagtgttttacaatcttattatgcttgtt
acaaggtctgcatttgatgaactccaggagaactacaccattctttggattgtattggat
tacacttcagatctgatctactacgttgattggtttgtcaaagcgagaacagcatttctg
gaacaaggacttcttgtaaaagactccaagaaattgcgagacaattatatagcaaaacct
atattcaagtatgacatgctggcaatgtttccaactgatttcctgtttttcaagtacgga
tacaacaaccctatgtttagatttaaccggctgttcaaaatgtctcggctccttgagttt
ttcgagcgcaccgaaactagaacaagttttcccaatgtgttccgaatcagcaaccttgtg
ctctacatcctgatcatcatccactggaacggttgcctgttcttctccatctcgaaatcc
attggctttggcacagacacctgggtgtatcccaacgccagccatcccgagtacggtcgc
ctggcccggaagtatatctactgcctctactggtccaccctcacgctcacctgtatcgga
gaggtcccgccgcccgtctccgactttgagtatcttttcgttgtgggtgacttcctcgtg
ggtgtgctgattttcgcctccatcgtcggtaacgtcggtgccatggtgttgaacatgaat
gcctcccgaacagacttccagactaaggtggattccatcaagcagtacatgtcgtcccgt
caggtctccaaggatctggaggcaagggtcatcaagtggtttgactacctctggacagag
aacaagacctgcgatgagaaagctgtgctcaagcacctcccggacaagctgaaggcggag
atcgccgtcaacgtccacttggacacggtgaagaaggtgcgcatcttccaggactgtgag
gcagcgctgctgatcgaactggtgctcaagctccagccgcaggtgttcagccctggggac
tacatctgcaagaagggcgacattgggagagagatgtacatcatccaggacgggaagctg
gccgtggtggcggacgatggcatcacgcagtttgtggtgctcggagagggcgcctacttt
ggggagatcagcatcctgggaatcaaaggcagtaaggcaggcaacaggagaacagccaac
atccggagtgtgggctactccgacctcttcgccctctctaaagatgacctgatggagtct
ctcactgagtacccggaagccaagaaggccctggaggagaaggggaaagcgatcctgatg
aaggataacctgatcgacgaggccattgccaacgcaggagcagacccgatgatcctttac
gacaagattatgaatctgcagcaaaacgttgacaaaaccacaaccttgtttgcccgaatg
atggctgaacaggtgtccacccagaccaagcttaaggatcggatcaaaacaatggaggcg
caggtgaagtctctgagtaaggaggaggaggtggtcgaggataaaaaggaggaaccacca
aaaaaataa
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