Alosa sapidissima (American shad): 121678492
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Entry
121678492 CDS
T11137
Name
(RefSeq) paired mesoderm homeobox protein 1-like
KO
K09329
paired mesoderm homeobox protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121678492
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121678492
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121678492
NCBI-ProteinID:
XP_041914030
LinkDB
All DBs
Position
12
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AA seq
244 aa
AA seq
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MTSSYAPVMDRQATLPCRTESPITANLEHLQAKKNFSVSHLLDLEEAREMVGTQTEDNTG
ESGRNMLESPGLTSGSDTAQQENERLTTDEKKKRKQRRNRTTFNSSQLQALERVFERTHY
PDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNSSLLKSFSSDVTVEQPM
VPRPAPRPNDYLSWGSSSSYSAMATYPPTCANTTSTQGMNMANSIANLRLKAKEYSLNQV
PTVN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagctatgcgcctgtaatggacagacaagccacgctgccctgccgtaccgaa
agtccgatcaccgctaacctggaacatttgcaggctaaaaaaaacttttcagtaagtcac
ctgttggatctagaggaagcccgtgagatggttggaactcagacggaggacaacacgggg
gagtcgggtcggaatatgctggagtctcccggtctaacaagcggcagcgacacagcacaa
caagaaaatgagcgtctgaccacggacgagaagaagaagaggaagcagcgccggaacagg
accaccttcaacagcagccagctgcaggctctggagcgcgtcttcgagcgcacccactac
cctgacgcctttgtcagggaggacctggcacggcgggtcaacctcaccgaagcccgcgtg
caggtgtggttccagaacagacgggcaaagttcagacgaaacgagagagccatgctggcc
agtaagaattcttcgcttctcaagtcgttctccagcgatgtaaccgtggagcagccaatg
gtgcctcgcccggccccgagacccaatgactacctgtcctgggggtcatcgtcctcttac
agtgccatggccacataccctcccacatgtgccaacacgacttcaactcagggaatgaac
atggccaacagcattgccaacttgagactaaaagcaaaggagtatagcctgaaccaggtg
cccactgtcaactga
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