Alosa sapidissima (American shad): 121679546
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Entry
121679546 CDS
T11137
Symbol
sec31a
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121679546 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121679546 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
asad02044
]
121679546 (sec31a)
Membrane trafficking [BR:
asad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121679546 (sec31a)
Secretion system [BR:
asad02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
121679546 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
TPR_Sec16
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
121679546
NCBI-ProteinID:
XP_041914272
LinkDB
All DBs
Position
13:complement(25717715..25753196)
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AA seq
1952 aa
AA seq
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MKLKEINRTAIQAWSPAQQHPVYLATGTSAQQLDASFSTSASLEIFQLDLTDPTLDMKTS
GTFSSPHRYHQLAWGPHGIGSDGHPSGVLIAGGENGNIILYDPAKILDGSSDVVIDQSTK
HTGPVRALDVNPFQTNLFASGGNESEIYIWDLNSFSSPMTPGPKSQPLEDVSCVAWNGQV
QHILASASPSGRASIWDLRKNDLIIKVSDHSNRMHCSGLAWHPEVATQLALASEDDRMPV
IQMWDLRFATSPLKVLENHTRGVLAIAWSLADPELLLSCGKDNRILCWDPNTAEVLYELP
TSSQWCFDIQWCPRNPALLSAAAFDGHISVYSIMGGKNDAVSLKQADQISTSFGNLDPFG
TGQTLPPLQLPQAPTAPSTVTPLKKPPKWIRRPVGASFAFGGKLVSLENGNPLPQPTQQP
LPRVVHVSQVVTETAFLERSGQLQATLSAGSFAEFCQTKIEAAPSEFEKAVWSFLKVNFE
DDSRGKYLELLGYKKEELALKIAEALEKKDSQPAEAVSEPLAVPESQPEPEPEPEPEPQT
QEPEAEPAPPEPTPDFPADSFSVFPADSFSISQPVILHQLHQPEAVPEPQTEPAVELVPP
PQVEPAIPPELAAEHVPKSEVELAPETQVEPISEVEFVPEAEVMFAPGPQAEVQPELQAG
LMPEPQLELVPNVQPEAHTVSGTLPPEAAAVGQPPEAAILEPLSEVALLEPPPEAATLEP
LPKAAILEPSPQAAILEPLSEVALLEPPPEAATLEPLPEAAILEPSPQAAILEPLSEVAL
LEPPPEAVTLEPLPEAAILEQSPEAITLDPSLQPLIPLDASPAASLHLTPEAMALVDLQD
FSVPTLAPPLNLQQQPVSLFAPPCEVQQALPVFAPPSDIQQSLPLFAPSPAQLLLAPADQ
LPPGNTGFTSPPYPSDASAVPLAAPGFGLAPMEVPAPQIDLASSVDLSFPPVAQLPVNEC
IPQDVQPPVLDTVPGIVSSPAPEPVPAVGILPVPEPLPVVGISPVSQLLPVVGISPVPES
IPAVAVPPVPQCIPAADLSAPPPEVPVVDPSPPVPLHPVPMFTPGAPSQQLSQACDLSDR
AEGAPEPRVVMQAPAPEPVVDLPGDTQEPVVPAPSEEERTLQEWEPEEEVELQLEEDMLP
EPEPVAVVEPEMEEEKEEKEEEEEAADDLIEEPLEDPTEDISTGPAEPAREPEVAVEPPA
PAPSVSEPVKLKVSKEVDGLITQALLTGDFESAVDLCLHDNRMADSIILAIAGGPELLER
TQKKYFLKTQTKITKLISAVVMRDWLDILQTCELHSWREALAAVMTYAKPEDFSNLCGLL
GSRLEQAEDLSLQAQACLCYICAGSVEKLVTCWTKAQESQCPLSLQDLVEKVVILRQAVE
RTHGAQASTMGTMLAQKMGQYASLLASQGSLDTALAYLPENSNQEVVERLRDRLSRALGH
QAAPVTATPQAPSAHPAPTNMPTARPAAAPAYAYNQQHSAQPVPAPAPAHTAPQYYQQFR
SASTVTSWSNQTPTVLPSAPRPLGPAPEPQVDPSVPPFGLQAPVSAAPPASSAPGYMHSQ
QYPQIFPHYNAGAAAPPALYNPLQYSSSPPSGGAAYPPSSSAPYPHHYMPSAAPYPPSPA
TAYPSHPHHHHPPPLPHSLPSPPAASVAPSFPSPPPVASSSFAPSSPPPLMGGSTFQQGG
LGSPVSNVPPALLPPGASGTETHASGDTQVPASQRTGSMSQDENDLAEGPQNGWNDPPNL
TRGPKKKKVLDNYAPPAPITAPIMSPLGEPQPQAPTGPPQPYPQPGLQAPYAPMQHHPPQ
GVAPAPGPPSVPLMNLQGAPGAPTGDRIQPMQKLPAEKVSKKPIPQEHMMLKTTFEGLVQ
KCLAAASDPQTKRKLDVANKRLEMLYDKLREQSLSPAIVGGLHNMARSIESRAYTDGLNI
HTHIVSSSNFSEISAFMPVLKVLLTEAIKLGV
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaagagatcaaccgcacagctatccaggcctggagcccagcgcagcagcat
ccagtctacctggccacaggcacctctgcccagcagctagatgccagcttcagtaccagc
gcctcgctggagatcttccagctggacctgactgacccgacactggacatgaagaccagc
ggcaccttctcatcccctcacaggtaccaccagctggcgtggggtccccatggcatcggg
tcagacggacatccctcaggggtgctcatcgctgggggagagaatgggaacatcatcctg
tatgaccccgccaagatcctcgatggcagcagcgacgtggtcatcgaccagagcaccaaa
cacacaggccccgtccgggcgctcgatgtcaaccccttccagacaaacctgttcgcctca
ggagggaatgagtcagagatctacatctgggacctgaactccttcagctctccaatgacc
cccgggcctaaatctcagcccctggaggatgtgagttgcgtagcgtggaacggtcaggtg
caacacatccttgcgtctgctagccccagtggccgagcctccatctgggacctgcgcaag
aacgacctcatcatcaaagtcagcgaccacagtaaccggatgcactgctcggggttggca
tggcacccagaggtggccactcagctggcgttggcgtctgaagacgaccgcatgcccgtc
atccagatgtgggacctgcgctttgctacctcacccctcaaagtgctggagaaccatacc
agaggtgttttggcaattgcctggagtctggcagatccagagctgctgctgagttgtggg
aaagacaaccgcatcctgtgctgggatccaaacacagccgaggttctctatgagctgccc
accagtagccagtggtgttttgacatccagtggtgccccaggaaccctgcgctcctctcc
gctgctgcctttgatggccacatcagcgtctactccatcatggggggcaagaatgacgcc
gtcagcctcaaacaggctgatcagatcagcacgtcgtttggtaacctggacccgtttggc
acgggtcagactctgccaccgctacagctgccccaagcccccactgccccatccacagtc
acccccctcaagaaaccccccaagtggatccgtcgccctgtcggagcctcatttgcgttt
ggaggcaaactggtttccttggagaacggcaaccctctccctcagcctacccagcagcct
ctgccccgtgtggtgcacgtcagccaggttgtcacggagacggcgttcctggagcgctcc
ggtcagttgcaggccactctgagtgccggcagcttcgccgagttctgccagacgaagatc
gaggcagcgcccagcgagtttgagaaggcggtgtggtccttcctcaaggtgaactttgag
gacgacagtcgtggaaagtacctggaacttcttgggtacaaaaaggaggagttggcactg
aagattgctgaggctctggagaagaaagactcccagcctgcagaggccgtatctgagcct
ctagcggttcccgaatctcaaccagaaccggaaccggaacctgagccggaaccacagact
caagaacctgaggctgaacccgcacctcctgaacctacgccagacttccctgctgactcc
ttctccgtctttcctgccgactccttctccatttcacagcctgtgatactccatcaactc
catcagccagaagcagtgcctgaacctcagacagagcccgcagtggagcttgtacctcca
ccacaagtggaacctgcgattccaccagaacttgcagcagaacacgtacctaaatccgag
gtggaactggcccctgaaacgcaagtggaacccatttctgaagtggaatttgtacctgaa
gctgaagtgatgtttgcaccaggaccccaggcagaagtccaacccgaacttcaagcaggt
cttatgcctgaacctcaattggaactcgtaccaaatgttcaaccagaagcacacactgtc
agtggaacattgcctcctgaagcagccgcagtgggacaacctcctgaagcagctattttg
gaaccgctttctgaagtggctcttctagaaccacctcctgaagcagcgactctggaacca
cttcccaaagcagccattctggaaccatctcctcaagcagctattttggaaccgctttct
gaagtggctcttctagaaccacctcctgaagcagcgactctggaaccacttcccgaagca
gccattctggaaccatctcctcaagcagctattttggaaccgctttctgaagtagccctt
ctagaaccacctcctgaagcggttactctggaaccacttcctgaagcagccattctggaa
caatctcctgaagccattaccttggacccctctttacaacctctcattcctttggacgcc
tctccagctgccagccttcatctgacacctgaagccatggcactggtggacctccaggac
ttcagtgtcccgacacttgctcctccactcaacctgcagcagcagcctgtgtctctattc
gcgcctccctgtgaagtccagcaggctcttcctgtatttgctcctcccagtgacatccag
caatcgcttcctttattcgcaccttcaccagcacaactgcttcttgccccagcagatcaa
ctaccccctgggaacacaggcttcacgagtcccccttacccttcagatgcgtcggctgtt
cccctagcagctcctggctttggtctggcccccatggaagtcccagctccccagattgac
cttgcgtcttcagttgacctctcctttccaccagtggcccaacttcctgtaaatgaatgt
ataccccaagatgtccaaccacctgtgcttgatactgtacctggcattgtctcctcacct
gctcctgagcctgtacctgctgttggtatattacctgtacctgagcctctacctgttgtt
ggcatttcacctgtatctcagctgctacctgttgttggcatttcacctgtacccgagtct
atacctgctgttgccgttccacctgtgccacagtgcatacctgctgcagacctttctgct
cctccacctgaagtgcctgtagttgacccgtctcctccagtacccttgcatccagtgccc
atgttcacacctggtgccccttcacagcagctgtctcaggcgtgtgacctctctgatcga
gcagagggcgcacctgagccccgggtggtcatgcaggctcctgcccctgagcctgtggtg
gatctaccaggggacacgcaggagccagtggtccccgctccctccgaggaggagagaacc
ctacaggagtgggagccggaggaggaggtggaactacaactggaagaagatatgctgcca
gaaccagagccagtggctgtggtggaaccggagatggaggaggagaaggaggagaaggag
gaggaggaggaagcagctgatgaccttattgaagaacccttagaagatcccacggaggac
ataagcacaggacctgcagaacccgcgagggaacctgaagtggcggtcgaaccacccgca
cctgctccatccgtttcagaacctgtcaaactcaaagttagcaaagaagtggacggtctg
atcacacaggcactgctcacaggcgactttgagagcgccgttgatctctgtctccatgac
aaccggatggcggacagcatcatcctggccatcgctggtggaccggaactcctggagagg
acccagaagaagtacttcctgaagacccagacaaaaatcaccaagctcatcagtgcggtg
gtgatgagggactggctggacatcctgcagacatgtgaactgcacagctggagggaggcc
ctggcagcggtcatgacctacgccaagcctgaggacttctccaatctctgtggtctgctg
ggctctcgtctggagcaggcggaggacttgtcgctgcaggcccaggcgtgtttgtgttac
atctgcgctggcagtgtggagaagctcgtgacctgctggaccaaagcccaggagtcccag
tgtccactctcactgcaggacctggtggagaaggtggtgattctgcgccaggcggtggag
cggactcacggggctcaggcctccaccatgggcaccatgttggcacagaagatgggccag
tacgccagtctgctggcgtcgcagggtagtctggacaccgccctggcctacctgcctgag
aacagcaaccaggaagtggtggagaggctgcgggatcgtctcagcagggctcttgggcac
caggccgcccccgtgactgccaccccccaggcccccagtgcccaccctgcgcccaccaac
atgcccacagccaggccagcggcagcgccagcgtacgcctacaatcagcagcactccgca
cagcctgtgcccgccccggcacccgcacacacagcacctcagtactaccagcagttcagg
tccgcctccacagtcacctcctggagtaaccaaaccccaactgtccttcccagtgcccct
cggcctctaggccctgcccctgaaccacaggttgaccctagtgttccaccatttggtctt
caggctcctgtgagtgctgcccctcctgcgtcatctgccccaggctacatgcactcacag
cagtatcctcagatctttcctcactacaatgccggggcagctgctcccccagccctctac
aaccctctccaatactcttcatcgcccccttctggtggggctgcttatcctccctcctcc
tctgccccctacccccaccactacatgccctctgctgccccctacccccccagccctgcc
acagcctacccctcccatccgcatcatcatcatcctcctcctcttcctcactcgctgccc
tctcctcctgcggcctctgtcgctccctccttcccctctcctccgcctgtcgcctcctct
tccttcgctccttcctctcctcctccgctgatgggaggaagcacgtttcagcagggcgga
ctgggctcccccgtgtccaacgtgccccctgcactgctgccgcccggagcctcaggtaca
gagacgcatgcctcaggtgacacccaggtgcccgcctcacagagaacagggtcgatgagc
caagatgaaaacgatctggctgaaggacctcagaatggttggaatgacccccccaacctg
accagaggccccaagaagaagaaggttctggataactacgcccctcctgcccccatcacc
gcccccatcatgtctccgctaggggagccccaaccccaggcccccacgggccccccacag
ccctacccccagcctggcctgcaggccccctacgcccccatgcagcaccaccctccccag
ggcgtagccccggcccccggacccccctctgtgcccctcatgaacctgcagggggcacca
ggagcccctacaggagaccgcatccagcccatgcagaagctgccagcagagaaggtatcc
aagaagccgatcccacaggagcacatgatgctcaagaccacattcgagggactcgtacag
aaatgcctggctgctgcctccgatccgcaaaccaagaggaagctggacgtggccaacaaa
cgccttgagatgctgtatgacaagctgagggagcagagtctctctccagccatcgtgggt
ggcctgcacaacatggcgcgcagcatcgagtcgcgggcgtacaccgacggccttaacatc
cacacacacatcgtgagcagcagcaacttcagcgagatctccgccttcatgcctgtactc
aaagtgctgcttacagaggccatcaaactcggggtgtga
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integrated database retrieval system
