Alosa sapidissima (American shad): 121679601
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Entry
121679601 CDS
T11137
Name
(RefSeq) transmembrane channel-like protein 2-A isoform X1
KO
K21988
transmembrane channel-like protein
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121679601
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asad02000
]
121679601
03037 Cilium and associated proteins [BR:
asad03037
]
121679601
Transporters [BR:
asad02000
]
Other transporters
Pores ion channels [TC:
1
]
121679601
Cilium and associated proteins [BR:
asad03037
]
Other cilia and associated proteins
Stereociliary proteins
121679601
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DM_Arn
Motif
Other DBs
NCBI-GeneID:
121679601
NCBI-ProteinID:
XP_041914365
LinkDB
All DBs
Position
13:14908472..14926328
Genome browser
AA seq
962 aa
AA seq
DB search
MMAELSPEVPHRNSRTDHQRNDTECREEKQQGNWRMLTMHWYVLCSANLTAVGIDIDGEV
ETGSEEDTKPKANGRGRQAAGRRGKRAMESEDAEDDEDKEDEAPRNKRAANRRKAGKKAK
DTEDESEGESKAGGRGRNKKGGGKKGKEEQKGKGKGKDDDKEEQKGKVKGKGKDDDKKKK
KGKGSSSDSKTDSEEEESMSEGELARLTEEVEEKKKLIANIRTKPWRMRRRLTVLKESQE
FVDKFEGALGGKGKGRAWFAYKVMMKKKWIKFQRDFENFRTSCIPWERKIKEVESHFGSS
VASYFIFLRWMYGLNLVLFSLMFGLVVIPEVLMGLPYGSIPRKTVPRAEQPTAMDYSVLM
DFNGYCKYSVLFYGYYNDQRTVGPLKFRLPLSYLLVGIGIFGYSLMVVIRTMAKNQDVGG
GDDADSEFTFSWKMFTSWDYLIGNPETADNKYASVTTSFKESIVDEQENQKDENIHLRRF
LRVLANFMITCILGGSGYLIFFAVSRSQEFANRDDIGWYEKNEVEIIMSLLGLVCPPLFE
TIAELEEYHPRIALKWQLGRIFALFLGNLYTFLFALFDEVNNKLEEEVHIKNNSVWFLKE
YLANFSMYNNDSEATAPPINPADAIRGPCWETSVGLEFVKLTVSDIQVTYLTILIGDFLR
AFIVRFLNYCWCWDLEAGFPSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLL
SSMYYQCWAVMCCNVPHERVFKASKSNNFYMGLLLLILFLSLLPVVYTIMSLPPSFDCGP
FSGKAKMFDVVMETIDLDLPAFVGTLFGYVANPGLIIPGVLLMVLAIYYLNSVGEAYKNA
TLELKKKMQMARDEEKNRRNNKESTNQQQQDLEDLLPKRSLAPPPPPENNTEKKEEKGGR
GTRVKPGAAGGVNMQKDVSLASANPNARGPVTREPAPRGPGALPGNPQERGARGRGRGAP
RQ
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagaactgagccctgaggtgcctcaccgaaattccagaacagatcatcagaga
aacgacacagaatgccgcgaagagaaacagcaaggaaattggaggatgctgaccatgcac
tggtatgttctgtgttccgctaacctgactgcagtgggaatagatattgacggtgaagtg
gaaaccgggagtgaggaggacaccaagcccaaggccaatggtagaggaaggcaagccgcg
ggcagaaggggcaaaagagcgatggagagcgaagatgcagaggatgatgaagacaaagag
gacgaagctcctcggaacaaacgagcggccaacaggaggaaggcgggaaagaaagccaag
gacactgaggacgaaagcgaaggggagtccaaggcagggggcagagggaggaacaagaag
gggggagggaaaaaagggaaggaggagcagaagggcaaagggaaaggaaaagacgatgat
aaagaggagcagaagggcaaagtgaaaggaaaagggaaagacgatgataaaaagaagaag
aaaggcaaaggaagcagctcggactccaagaccgattctgaagaggaggagtccatgtcc
gaaggagagttggcccgactcacggaggaggtggaggagaagaagaagctcattgccaac
atcagaaccaagccatggcggatgagacgccgcctgacagttctcaaagagtcccaggag
tttgtagacaaatttgaaggtgctctgggggggaagggcaaaggaagagcatggtttgcc
tacaaagtgatgatgaagaagaaatggatcaagtttcagagagattttgaaaatttcagg
acatcctgcataccatgggaaaggaagatcaaagaagtggaaagtcactttgggtcatcg
gtggcctcctacttcatattcttgcggtggatgtacggtctgaacctggtgctcttcagc
ttaatgtttgggcttgtggtcatccccgaggttctaatggggctaccatatggatccata
cctcggaaaacagtacctagagctgaacagcctacggctatggattactctgttcttatg
gacttcaatggttactgcaaatactcagtgcttttctatgggtactacaatgaccagagg
accgttgggcctctgaaattccgactgccactctcttatctattggtagggattggaatc
ttcggctacagcctcatggttgtcattagaacaatggctaaaaatcaggatgtcggcggc
ggggatgatgcggatagtgagttcactttttcctggaagatgttcaccagctgggattac
cttatcgggaatcctgagacagcggataacaaatacgcctcagtcaccacaagcttcaag
gagtccatcgtggacgagcaagagaaccagaaagatgagaacatccacctgcggaggttc
ctgcgggtgctggcgaacttcatgatcacctgcatcctgggaggcagcggctacctcatc
ttctttgcggtctcgcggtcacaggagtttgccaacagggatgacattgggtggtacgag
aaaaatgaggttgagatcatcatgtctttactgggcctggtctgccctccattgtttgaa
accattgctgagctagaggaataccatccccgtattgccctcaaatggcaactcggtcgc
atatttgccctcttcctaggcaacctctacaccttcctctttgctctgtttgacgaggtc
aacaacaagcttgaggaggaagtacacattaagaataactcagtttggttcctgaaggag
tacctagccaacttctccatgtacaacaacgactctgaggccacggctccgcccatcaac
cctgctgatgccatccgcggaccgtgttgggagactagcgttggacttgagtttgtgaag
ctgactgtttcagacatccaggtgacctacctgactattctcataggtgacttcctacgg
gccttcattgtgaggtttctcaactactgctggtgctgggacctggaggcaggatttcca
tcatatggagagtttgatatcagtggcaatgtcctggggctggtcttcaatcaaggaatg
atctggatgggtgcattttacgcccctggtttggtgggcatcaacgtcttacgtctgctg
agctccatgtactaccagtgctgggctgtgatgtgctgtaacgtgccccacgagagagtc
ttcaaggcctccaagtccaacaacttctacatgggcctcctcctcctcattctcttcctc
agcctgctgcctgtagtctacaccatcatgtctctgccgccctcctttgattgtggtcct
ttcagtggtaaagcgaagatgtttgatgttgtcatggaaacaattgacctggacctgccg
gccttcgtagggacgctgtttggttatgtggcaaacccagggctcatcataccaggtgtt
ctgctcatggtgcttgccatatattacctgaactctgtaggagaagcctacaagaatgcc
accttggagctgaaaaagaagatgcagatggccagagatgaggaaaagaacaggcgtaac
aacaaggaaagcaccaaccagcaacagcaggacctggaagacctgctcccgaagcgatct
ctggcacctccccctcccccagagaacaacaccgaaaaaaaagaggagaaaggtgggagg
gggaccagagtgaagccaggtgctgcaggaggcgttaacatgcagaaggatgtgtcactg
gcatcagccaatccgaacgctcgagggccagtgacccgggaacctgcacctcggggacca
ggggcacttccgggaaacccacaggaacgtggcgcaagaggtcgaggacgaggtgcccca
agacaataa
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