Alosa sapidissima (American shad): 121679607
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Entry
121679607 CDS
T11137
Symbol
psd3l
Name
(RefSeq) PH and SEC7 domain-containing protein 3 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121679607 (psd3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121679607 (psd3l)
Membrane trafficking [BR:
asad04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121679607 (psd3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
121679607
NCBI-ProteinID:
XP_041914379
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Position
13:complement(12161823..12251381)
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AA seq
1388 aa
AA seq
DB search
MEDHHQVKTSFLFIQLQSPSKARQQPCPASRACLATSEEGYRSSVSAEGPGPGPSPEQQS
SPEGCGVVDTWSAEACVISEEEHLEEGIGRSLAHSTESPAGDASGYACLHIDEECVSLTE
EKPTHPSDGTRCPSEVPVWILREESPDTMSGESPSTPRGSTSPKVPPKPSTAARTSFLYS
TGTHESQKITPEEKLAEETKPKTVYQTPVQPTMGTSVYRSSSNSWVHSAKYHEEAGHQSK
AQAAGVPRSPERATFLSAVIQRSSKLSGNAYRKSVSNLDASKPAPAATEPSVKTSPPPPP
VRSTVAVGAPTKPAPVTPVKQSSAKSTSMDKRGPKPPVPPKAETFVWVNNSSHAQSVAKA
KYEFLFGKSEESSSVTTVSSTGTEILPEKESSTSLDPEPSLQDDAELDETSLFQEIDREL
ASLLSGLKARCRDAGVDPQDDLDDVSPQACTDSGPHPFPTAMIPNGSSDGRPASAVSAQN
GCSEPGPVAAEEDAGEPASLLQQSDSFILDTWAEVLGQDTLSLSSVTEELQALSAGLLAL
DGTSGAAAAGQDKSLPDRTSGDETSVEVEGRRSSSTETQTQNASQMKADVVALDASLDES
SKILAEIPGIFTAFLDGGQSQSREKPPKKLRFVESREDGSQGSSSGAVNGTTTGGEGSHR
EEEEEERQQRLGQNSSGTMEKPQVEALEDEVFRALPKVCVLSPESESASEHSSRSAEGAK
SSEAEAKKSQGSDEATDVFSSHFESIVESDRLRSTLYSSLDSLDALSSADDDPEPEPSFT
FDLPLTPMIQQRLKESGHFLDGVAPDFGRQEVLSVTATGKSGKGALEVTTSFVDVTDSGD
RTSVSTETETASSRHSSDNSAGSVANGVVENAGQDSKDWLQGCLRSDADLKEALSGWDSD
MGSTERLKDSNDALHNSSGGSGSNRGDQEAARRLARRLYHLEGFRRSDVAKHLGKNNDFS
KMVAEEYLTFFEFTGMTLDQSLRTFLKAFALMGETQERERVLIHFSNRYYQCNPSIIASQ
DGVHCLTCALMLLNTDLHGHNIGKKMTCQEFINNLDGLNEGQDFPRELLKALYNSIKNEK
LEWAIDGDELKKSLSELADNKTENAHSKGISRIGSGSNPFLDIAHDPNAAVYKTGFLARK
IHADMDGKKTPRGKRGWKTFYAVLKGMILYLQKDEYKPEKALSEDDLKNAISVHHALAIK
AEDYEKKPNVLKLKTADWRVFLFQAQSPEEMEFWIKTVNSVAAMFSAPSFPAAIGSQKKF
SRPLLPATTTRMSQEEQLKSHEAKLKHISTELAEHRSYPPDKKVKAKEIDEYRLKEHYLE
FEEKRYDMYVQLLKDGVKELLAGKEAEAALKKSQSSPSLNQESQPAGAKVKRNTSERKDY
RPEPPKVT
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcatcatcaggtcaaaacttccttcctcttcatccaactgcagtcgccctcc
aaggcccgccagcagccgtgtcctgcgagcagagcctgcctggccacctcagaggaagga
taccgcagcagcgtttcagcagaaggtccaggtccagggccaagcccggagcagcaaagc
tcaccagaagggtgtggtgttgtggatacttggagcgcagaggcctgtgtcatcagtgaa
gaggaacaccttgaggaaggaatcggcaggtctttggcgcactccactgagagccctgca
ggagatgccagtggttatgcatgtcttcacatagatgaggagtgtgtgagtttgacggag
gagaaaccgacacacccgtcagacggcacaaggtgtccctccgaggtccctgtgtggatc
ttgcgtgaagagagcccagataccatgagtggggagagcccatctacaccaagggggagc
acatcccccaaggtgccccccaaaccttctacagctgcccgcaccagcttcctctactcg
acggggacacacgagtctcagaaaataaccccagaagaaaagctggcggaagagaccaag
cctaagaccgtttaccagacccctgtccaacccaccatgggcaccagtgtgtatcgctcc
tccagtaacagctgggtgcacagtgctaagtaccacgaggaggctggtcaccaaagcaag
gctcaggcagcaggagtacccaggagcccagagagagctacctttttgtctgccgttata
cagaggtcttcaaagctttctggtaatgcgtacaggaagtctgtgagcaatctggacgcc
tccaaaccagcacctgctgctacagagccctctgtgaagacatcacctcccccacctcca
gtgcgttctactgttgcagttggggctcctaccaaacctgctccagttactccagtgaag
cagtcctctgcaaagagcacctcaatggacaaacgaggccccaagcctcccgttcccccc
aaggctgaaacattcgtttgggtcaacaactcctcacatgctcaaagtgtcgccaaggcc
aaatacgagtttctcttcgggaagtcagaagagtcaagctctgttaccactgtgtcatcg
actggaactgagattctaccagaaaaggaaagcagcacaagtttagaccctgagccgagt
ctgcaggatgacgccgagctggacgagacgtccctcttccaggagatcgatcgcgagctg
gccagcctgctgagcggccttaaggccaggtgtcgggatgcaggcgtggacccccaagac
gacctggacgacgtctcaccacaggcctgcaccgacagcggcccccatcccttccccact
gccatgatccccaacggctccagcgacgggcgaccagcctccgccgtaagcgcccagaat
ggctgctccgagccgggcccggtggcagcggaggaggacgccggtgagccagcctcgctt
ctgcagcagtcagacagcttcatactggacacatgggcagaggtgctggggcaggacacg
ctctcgctcagctccgtcacggaggagctgcaggcgctgagcgcaggactgctggctctg
gacggcaccagtggcgccgccgccgctggccaagacaaatccctgccggatcgcacatct
ggagacgagacttcggtggaagtggaagggagacggtcctcgagtacagaaacccaaact
cagaacgcgtcccagatgaaggctgatgtggtggccctggacgcgtcgctggacgagtcc
agcaagatcctggccgagatcccggggatcttcactgccttcctggacggcggccagtcg
cagtcgcgggagaagcccccaaagaagctgcgctttgtggagagccgagaggacggatcg
cagggctcgagcagcggcgccgtgaacgggaccaccacgggcggcgagggatcgcacaga
gaggaggaggaggaggagcgacagcagcggctggggcagaactcctcggggaccatggag
aaaccccaggtcgaggcgctggaggacgaggtgttcagggcgctccctaaggtgtgtgtg
ctcagcccggagagtgagtccgcatcggaacacagctcaaggagcgccgaaggggccaag
tcttcagaggcggaggccaagaagtcgcagggcagcgacgaagccactgacgtgttcagc
tcgcattttgagagcatcgtggagtcggaccgcctgcgcagcacgctctacagcagcctg
gactcgctggacgccctgtcgtcggctgacgacgaccctgagcccgagcccagcttcacc
tttgacctgccgctgacccccatgatccagcagcggctcaaggagagcggccacttcctg
gacggagtcgcgccggactttggccggcaggaggtgctcagtgtcacggccaccggcaag
agcgggaagggtgccctggaggtgaccacgtcctttgtggatgtgacggacagtggggac
cgaacgtctgtctccacagagacggagactgcatcgagcagacattccagtgacaattct
gccggatctgtggcaaatggagtggtggagaacgcgggacaggactcaaaagactggctg
cagggctgcctgaggagcgatgcggacctgaaggaggcgctgtcgggctgggactcggac
atgggcagcacggagaggctgaaggacagcaacgatgcactccacaacagcagcggcggc
agtggcagcaaccgcggcgaccaagaggccgccaggcgcctggcacgccggctctaccac
ttggagggtttccgccgctctgacgtagccaagcacctgggcaagaacaatgacttcagc
aagatggtggccgaagagtacctcactttttttgaatttacagggatgacattggaccaa
tctctcagaacctttctgaaagcttttgcactaatgggtgaaacccaggaaagagagcgg
gttttgatccacttctccaataggtactatcaatgtaacccctccatcatcgcctcacaa
gatggagtgcattgccttacctgtgctttgatgctgctcaacacagaccttcatggccat
aatatcgggaagaagatgacgtgtcaagaattcatcaataacttggatgggctaaacgaa
gggcaagatttccctcgagagctcttaaaggcattgtacaactcaatcaaaaatgagaaa
ctggagtgggcaattgatggtgacgagttgaagaagtccttgtcagagctcgctgacaac
aagaccgaaaatgcccactccaagggcatcagcagaattggcagtggcagcaacccattc
ctggacatcgcacatgaccccaacgccgctgtctacaaaacgggtttcctggcccgcaaa
atccatgctgacatggatgggaagaaaacacctagggggaagcgtggttggaaaaccttt
tatgccgttctcaaaggaatgatcctttatctgcaaaaggatgagtataagcctgagaag
gctttgtctgaggatgacctgaagaatgctatcagcgtgcaccatgccctggccatcaag
gccgaggactatgagaagaaacccaacgtgctgaagcttaagaccgccgactggagggtc
ttcctttttcaggcgcagagccccgaggagatggagttctggatcaaaaccgtcaactcc
gtggcggccatgttctccgcaccctcgttcccagccgctattggctctcagaaaaagttc
agccgcccattgctgccagcaaccaccacaaggatgtcacaggaggagcagttaaaatcc
catgaggccaagctgaagcacatctccacagagttggctgagcacagatcctacccacca
gacaagaaggtcaaagccaaggaaatagacgagtaccgattgaaagagcactatctggag
tttgaggagaaacgttacgacatgtatgtgcagctcctgaaggatggcgtgaaggagctc
ctggccggtaaggaggctgaagcagccctgaagaagtcccagtccagcccctcgctcaac
caggagtcccagccggctggcgccaaagtcaaacggaacacctccgagaggaaggactac
cggcccgagccccccaaagtcacatag
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