Alosa sapidissima (American shad): 121679632
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Entry
121679632 CDS
T11137
Symbol
ap3b1a
Name
(RefSeq) AP-3 complex subunit beta-1 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121679632 (ap3b1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121679632 (ap3b1a)
Membrane trafficking [BR:
asad04131
]
Endosome - Lysosome transport
Others
AP-3 complex
121679632 (ap3b1a)
Endosome - Golgi transport
121679632 (ap3b1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
HEAT_GCN1
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
121679632
NCBI-ProteinID:
XP_041914470
LinkDB
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Position
13:complement(1071955..1203440)
Genome browser
AA seq
1082 aa
AA seq
DB search
MSTNNLSYNDQGGPDSAVEVGQETTPTSSTTGAAFGLFSTDFKKNDDLKEMLESNKESMK
LEAMKRIVGLIAKGKNASELFPAVVKNVASKNLELKKLVYVYLVRYAEEQQDLALLSIST
FQRALKDSNQLIRASALRVLSSVRVPIIVPIMMLAIKEAATDLSPYVRKTAAHAIQKLYS
LDPDQKEHLIDVIEKLLRDKSTLVAGSVVMAFEEVCPDRIDLIHKNFRKLCNLLVDVEEW
GQVVIINMLTRYARTQFTSPWKGDAIFEGSMAHAFYDSDEERKAHSNSEPYIMDPDHRLL
LRSTKPLLQSRNTAVVMSVAQLYWHLAPKHEVSIVTKSLVRLLRSHREVQYIVLQNIATM
SIQKKSMFEPYMKSFYVRSTDATHIKILKLEILTNLANEANISTILREFQTYVKSQDKVF
AAATVQAIGRCATNITEVTDTCLNGLVLLLSNRDETVVAESVVVIKKLLQTQPTQHSDII
KHMAKLFDNITVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTTEEDIVKLQIVNLA
AKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPNEKSGALAKYARRILLA
PKPAPVLESAFKDRDRFQLGTLSHTLNAKAVGYLELSDWQTVAPDQSVRNVEVVEQSKEW
VPSSAKESVKSGDKFYSDEEGDEGSPCNSTEDGKSTSSSEASTSETESEEESSSQSGSGS
EESEESSSHSHSDSSKKKKFQQKKTKNKGSDSDEENDCAKVGVSSPTHSSEDSSSSSSDD
STSHSESDSGGHQEKWSKAKPKVVQKTKNEITLLDLDDFSPDPRISTKSCVLSPSLLSDL
DGLSLSSSPSIVQVSSQAFVPMKSHELLHRMTGKGLAAQYHFSRQPSIYGNGMVAVQLNF
TNTSERTLEHIHIGEKSGQNIHGFNNIENLEPNASVAVSIGIDFKDSTQAANFQLCTKDD
KFSVSIQPAVGELLLPVTMTEQDFQKEQGNLLGMNETSATITLMSENTSIQPISRKVETV
ANMCVVPSNEDGIFRFAAKLASSGALVLASVELKASTAQLRVSTEKAVIGSMLLRDLKIA
LA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaacaacctgtcttacaatgatcagggaggaccggattccgctgtagaagtc
ggacaggagacaactccgacctcatcgaccactggagcagccttcggcctgtttagtact
gatttcaagaagaatgatgacctgaaagagatgctggaaagtaataaagaatcaatgaag
ctagaggcaatgaaaaggattgttgggttgattgccaaggggaagaatgcttctgaatta
ttcccagctgtggtgaagaatgtggcaagtaaaaatttagagctcaagaagttggtgtat
gtatatctggtcagatatgcagaggagcagcaagatcttgcccttctatcaatcagtacc
tttcagcgtgctttaaaggactccaaccaactaatcagagcaagtgctttgagggtgctc
tccagtgtccgtgtgcccatcattgtgccaattatgatgcttgctataaaggaggcagcc
actgacctctctccttatgtcaggaagaccgctgcccatgccatccagaagctttacagt
ttggaccctgaccagaaggagcacctgattgatgtaattgagaaacttctgagagacaaa
agcacattggtggcaggcagtgtggtgatggcatttgaagaagtgtgtccagaccgcatt
gacctgattcacaagaacttccgcaagttgtgcaacctgctggtggatgtggaggaatgg
ggccaggtggtcataatcaacatgctgacacgttatgcgcgcacacagttcactagccca
tggaaaggggatgcaatattcgaggggagcatggcacatgcattttatgactctgatgaa
gagaggaaagcgcactccaattctgaaccttacatcatggacccagaccaccggctactc
ctgaggagcaccaaaccactcttgcaaagcaggaacacagcggtggtgatgtctgttgcc
cagctctattggcatctggcccctaaacatgaagtgagcattgttaccaagtcactggtg
cgattgctgaggagccaccgggaagttcagtatattgtgttgcagaacattgccactatg
tcaatccagaagaagagcatgtttgaaccctacatgaagagtttctatgtccgctctaca
gatgccacacatataaagatactgaagctggagattttaaccaacctggccaatgaagca
aacatttcaacaatcctcagggaattccagacatatgtgaagagtcaagataaagtattt
gctgcagctactgttcaggctattggtcgctgtgccaccaacatcacggaggtgacggat
acctgtctaaatggcttggtgctactcttgtccaatagagatgaaacggtggtggcagag
agtgtggtggtgattaagaagcttttgcagacacagcccacacaacacagtgatatcatc
aaacacatggccaaactctttgacaacatcacggttcccatggcacgtgccagcatactt
tggctcattggtgagtactgtgaacatgtgccaaagattgccccggatgtcttgagaaaa
atggcgaagagcttcaccacagaggaagacattgtaaaattgcagattgtcaacctggcg
gccaaactctaccttacaaactctaagcagaccaagctgctgacacagtacatcctgaat
ttgggaaagtatgatcagaactatgatatcagggaccgcacacgcttcattcgtcaactc
atcgtccctaatgagaagagtggggcattggccaaatatgcccgtcgtatcttgctggca
cccaaaccagctcctgtgttggagtctgccttcaaagatcgagatcgcttccagctgggc
accttgtcccacaccctaaatgctaaagctgtgggctacctggaactctctgattggcaa
acagtagcccctgatcagtcagtgaggaatgtagaagtggttgagcagagcaaagaatgg
gtaccatcatcagcgaaggaaagtgttaaatcaggtgacaaattctactcagacgaggaa
ggagatgagggctcaccatgcaacagtactgaggacggcaagagcacaagcagcagtgaa
gcttctaccagtgaaactgagagtgaggaggagtcctccagccagagtggtagcggtagt
gaagaatcggaagagagttccagtcattcacactcagattccagtaagaagaagaaattt
cagcagaaaaaaacaaaaaacaaaggaagtgactcagatgaagaaaatgattgtgccaag
gttggtgtttcctccccaacacactcctcagaagacagttcttcaagctccagtgatgac
agcacatctcactctgagtctgattctggagggcaccaggaaaagtggagcaaggccaaa
cccaaggtggtgcaaaaaacaaaaaatgagatcacgctgttggatctggatgacttctcc
cctgatccacggatatccacaaagtcctgtgtgctctctccaagcttgctgtcagatttg
gatgggctctctctgtccagttccccttctattgtacaggtgagctcccaggcctttgtt
cctatgaagtcccatgaactcctccatcgaatgactgggaaaggtttggctgcccaatac
catttttcccggcagccttccatctatggaaatggcatggtggcagtacagcttaatttc
accaacactagtgagcgaacactggagcatattcacattggagagaaaagtggacagaat
attcatggcttcaacaatattgaaaacctggagccaaatgcttcagtcgcagtttccatt
ggcattgatttcaaggattccacacaggcagctaacttccagctgtgcacaaaagatgac
aagttcagtgtctctattcagccagctgtgggagagctgttactgcctgttactatgact
gagcaggactttcaaaaagaacaaggaaatttgcttggtatgaatgaaacctcagcaaca
atcaccctgatgtcagagaacacatcaattcagccaatcagcagaaaggtggagacagta
gccaacatgtgtgtggttccatctaatgaagatggtattttcaggtttgcagcaaagttg
gccagtagtggggctctggttctggccagtgtggaactgaaagctagcactgcacagttg
agagtcagcacagagaaggcagtcatcggctccatgctgctacgagacctcaaaattgcc
ctggcctag
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