Alosa sapidissima (American shad): 121679794
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Entry
121679794 CDS
T11137
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1 isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121679794 (kcmf1)
Enzymes [BR:
asad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121679794 (kcmf1)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121679794 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
DUF6244
Zn_SUZ12
TFIIA
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
121679794
NCBI-ProteinID:
XP_041914759
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All DBs
Position
13:14345792..14362242
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AA seq
401 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYETGATTTRHTTEHPMQCILTRVD
FDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGD
PNHVTDDFAAHLTLEHRAPRDLPHDETSGVRHVRRMFHPGRGLGGPRARRTNMHFTSSST
GGLSSSQSSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLE
RQQAQAARQQLETARNATRRGNPGNISGGGGGGGGGGGSGAAAIPPSSNAANNPASLPES
NALAQHTSQFLLTRLNEPKMSEAERQALEGERADRSLFVQELLLSTLMRDESSSSDEDER
RDFADFGAMGCVDIMPLDVALESLNLKSGSSTGKEPPPPPL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgaaggtgtgagctgtgacgcgtgtttaaaagggaacttcagagggcgc
cgctacaagtgtttaatctgctacgactacgacctgtgcgcctcgtgctacgagaccggg
gccaccaccaccagacacaccacggaacatcccatgcagtgcatactaaccagggtagac
tttgatctgtactatggcggtgaggccttttcagtagaacagccccagtcgttcacgtgt
ccctactgtggcaagatgggctacacagagacctccctgcaggagcacgtcacctcggag
cacgctgagacctccacagaggtgatctgccccatctgcgctgccttgcctggaggcgac
cccaatcatgtgaccgacgactttgccgctcacctcacacttgaacacagagcacctaga
gatttaccccacgacgagaccagcggcgtgcggcacgtgcgccggatgttccaccccggc
cgtgggctgggcggtccgcgggcccgccggaccaacatgcactttaccagcagctccacc
ggggggctctcctcctcacagagctcctcctactctccaagcaatagggaagccatggac
cccatagcagagttgttgtcccagctgtcgggcgtgcgccgctcggcgggcggtcagctc
aactcgtcgggcccgtcggcctcgcagctgcagcagctccagatgcagctgcagctggag
cgccagcaggcgcaggcggcgcggcagcagctggagacggcgcgtaacgccacgcggcgc
ggcaaccccggcaacatcagcggcggaggaggcggcggaggagggggaggcgggagcgga
gccgcggccatcccgccctcgtccaacgcggccaacaacccggccagcctgcccgagagc
aacgcactggcccagcacacctcccagttcctgctcacacggctgaacgagcccaagatg
agcgaggcggagcggcaggcgctggagggcgagcgggccgaccgcagcctgtttgtgcag
gagctgctgctgtccacgctcatgcgggacgagagctcctcctcggacgaggacgagcgc
cgagacttcgccgacttcggtgccatgggctgcgtggacatcatgccgctggacgtggcg
ctggagagcctcaacctgaagagcgggagctccacgggcaaggagcctccgccccctcct
ctttga
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