Alosa sapidissima (American shad): 121679964
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Entry
121679964 CDS
T11137
Symbol
dnai1.2
Name
(RefSeq) dynein, axonemal, intermediate chain 1, paralog 2
KO
K10409
dynein axonemal intermediate chain 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121679964 (dnai1.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121679964 (dnai1.2)
04812 Cytoskeleton proteins [BR:
asad04812
]
121679964 (dnai1.2)
Cilium and associated proteins [BR:
asad03037
]
Motile cilia and associated proteins
Dynein arm
121679964 (dnai1.2)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
121679964 (dnai1.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_HPS5
EIF3I
WDR55
WDR90_beta-prop_4th
Beta-prop_RSE1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
121679964
NCBI-ProteinID:
XP_041915002
LinkDB
All DBs
Position
13:8190815..8226006
Genome browser
AA seq
683 aa
AA seq
DB search
MPVPKKTVAARARRGSVFQAKTTDGPDFGDGVDDWLQGKTLVKPPDQLDLTEAELKEEFT
RILTANNPHAPQNIVRYSFKERSYKTISSVDQLAVHFVLEGNLLHKDSDEARRQRAKQGL
PEEKPVDTAAAETDEEKVETPGDAREEAGEEGGGEERPDSEEVKRGQKECKLTNQFNFSE
RASQTLNNPLRERECQTEPPPRANFSATANQWEIYDGYLEELQKQEKNKEKQKAQPTKKE
EDKGKKKMMMVEMQSDDISKVSKAAKIVERMVNQNTFDDIAQDFKYFEDASDEFRDQEGT
LLPLWKFQYDKAKRLAVTALCWNENYRDLFAVGLGSYDFTKQGRGMLLFYSLKNPTYPEN
IYLTTSGITCLDIHPHISYLVAVGFYDGCVGVYSLKEESSQPIYKSTAKSGKHTDPVWQV
RWQNDDMDHNHNFFSVSSDGRVVSWTLVKNELVYTDIIKLSLEGPPSDGTEGMQLPTMAC
GTSFDFHKQIDYLFLVGTEEGKIHKCSKAYSSQFLQTYDAHNMAVDAVKWNHFHPKVFIS
CSSDWTVKIWDHTIDTPMFTFDLNSAVGDVAWSPYSSTVFAAVTTDGRVHVFDLSINKYE
AICQQPVVAKKKTKLTHIQFNPEHPIIIVGDDHGYVNSLKLSPNLRKKPKEKKGQEVPKG
PEVEIAKMEKLLSLLREPESNSN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcctaaaaaaactgtggctgcccgagccagacgggggtccgtgttccaggct
aagacgactgacgggccagactttggtgatggggttgatgactggctccaaggaaaaact
ttggtgaaaccccctgaccagctggaccttactgaagcagaactgaaggaagaattcaca
aggatcctcacggccaacaatccacatgctccacagaatattgtccgctacagcttcaaa
gagcgctcttataagaccatcagtagtgtagaccaactggcagttcacttcgtcctggag
ggaaatcttcttcacaaggactccgatgaagctcgcaggcaaagggctaaacaaggcctc
ccagaagagaaaccagtggacactgccgcagcggagacagatgaggagaaggtggagact
ccgggcgatgcaagggaggaggcgggtgaggagggcggcggggaggagaggccagacagc
gaggaggtcaagagaggccagaaggagtgcaaactcaccaaccagttcaacttcagcgag
cgcgcttcccaaaccctcaacaaccccctcagggagagggaatgtcagacggaaccccct
cctcgtgcaaacttctcagccacagctaatcagtgggagatctatgatggttatttggaa
gagctgcagaagcaagagaagaataaggagaagcagaaagctcagcccactaagaaagag
gaggacaaaggcaagaagaagatgatgatggtagaaatgcagagtgatgacatcagtaaa
gtgtcaaaggccgcaaagatcgtggagcgcatggtcaaccagaacacatttgacgacatc
gcccaggacttcaagtactttgaggacgcctcggacgagttccgggaccaggaaggcacc
ctgctgccgctgtggaagttccagtacgataaagccaagagacttgctgttaccgccctc
tgctggaatgaaaactacagagatctgtttgctgtgggccttgggtcgtatgactttact
aaacagggccgaggcatgctgctgttctactccctgaagaaccccacctacccggagaac
atctacctcaccacgtccggcatcacgtgcctggacatccacccacacatctcctacctg
gtggccgtgggcttctacgatggctgcgtgggcgtctacagcctgaaggaggagagcagc
cagcccatctacaagagcacggctaagtccggcaaacacacagaccctgtctggcaggtg
cgctggcagaacgatgacatggaccacaatcacaacttcttctctgtgtcgtcagatggc
agagtggtgtcctggaccctggtcaagaatgagttggtgtatacagacatcattaagctg
tccttagagggtccgccgtcagatgggacagaaggcatgcagctgccaaccatggcttgt
ggcacatcatttgacttccataagcagattgactacctgttcctggttggcacagaagaa
ggaaagatccacaagtgctccaaagcatactccagccagttcctccagacgtatgatgcc
cacaacatggcagtggatgcggtcaagtggaaccacttccaccccaaagttttcatctcc
tgcagctctgactggaccgtcaagatctgggaccacaccattgacacacccatgttcacc
tttgaccttaactctgcggtgggggacgtggcctggtctccgtactcctccacggtgttc
gccgccgtcaccaccgacgggagggtccacgtttttgacttgagcatcaacaaatatgag
gccatctgccagcagccggtggtggccaagaaaaagaccaagctgacgcacatccagttc
aaccctgagcatcccatcatcatcgtcggggacgaccacggctatgtcaacagcctcaag
ctctcacccaatctacgcaagaagccaaaggagaagaaaggccaggaggtgcccaagggg
cccgaggtggagatcgccaagatggagaagctcctgagtttactgagggagccggagagc
aacagcaattaa
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