KEGG   Alosa sapidissima (American shad): 121679986
Entry
121679986         CDS       T11137                                 
Symbol
zgc:100918
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04137  Mitophagy - animal
asad04140  Autophagy - animal
asad04144  Endocytosis
asad04145  Phagosome
asad04148  Efferocytosis
asad05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:asad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121679986 (zgc:100918)
   04145 Phagosome
    121679986 (zgc:100918)
   04140 Autophagy - animal
    121679986 (zgc:100918)
   04137 Mitophagy - animal
    121679986 (zgc:100918)
   04148 Efferocytosis
    121679986 (zgc:100918)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121679986 (zgc:100918)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:asad04131]
    121679986 (zgc:100918)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asad04147]
    121679986 (zgc:100918)
   04031 GTP-binding proteins [BR:asad04031]
    121679986 (zgc:100918)
Membrane trafficking [BR:asad04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    121679986 (zgc:100918)
Exosome [BR:asad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121679986 (zgc:100918)
  Exosomal proteins of other body fluids (saliva and urine)
   121679986 (zgc:100918)
  Exosomal proteins of colorectal cancer cells
   121679986 (zgc:100918)
  Exosomal proteins of bladder cancer cells
   121679986 (zgc:100918)
GTP-binding proteins [BR:asad04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    121679986 (zgc:100918)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase cobW ATP_bind_1 PduV-EutP nSTAND3 Septin AAA_16 AAA_22 NTPase_1 AAA_7 DUF5992 AAA_24 G-alpha SUIM_assoc AAA_5 SRPRB ATPase_2 ABC_tran NACHT NB-ARC AAA_14 ATP-synt_ab
Other DBs
NCBI-GeneID: 121679986
NCBI-ProteinID: XP_041915042
LinkDB
Position
13:complement(10630701..10632848)
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNSIPYFETSAKEAINVDQAFQTIARNALKQESQV
ETYDFPDQIKLRDDRPASSSEGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctcgagaaagaaggtgctcttgaaagtgataatcctcggagactctggggttggg
aaaacttcactgatgaaccagtatgtcaataagaagtttagcaaccagtacaaagcaact
atcggtgcagattttttgactaaggaagtaatggtggatgacaggcttgttactatgcag
atctgggacacagccggacaagaacgatttcagtcactgggtgtggcgttttatcgtggg
gctgattgctgtgtactggtctatgatgttactgcacccaacacgttcaaaacccttgac
agctggcgggacgagttccttatccaagccagcccgcgagatccagagaacttccccttt
gtggtactcggcaacaagattgacctagagaatcggcaggtgacaacaaaaagagctcag
gcatggtgtcagagcaagaacagtatcccatactttgagaccagtgccaaagaggctatc
aatgtcgaccaagctttccagaccatcgcccgaaacgccctcaaacaggaatcacaggta
gagacgtacgatttccccgaccagatcaaactgcgagatgacagaccggcctcctccagc
gagggctgcagctgctga

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