Alosa sapidissima (American shad): 121680125
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Entry
121680125 CDS
T11137
Symbol
sdad1
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asad03009
]
121680125 (sdad1)
Ribosome biogenesis [BR:
asad03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121680125 (sdad1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Motif
Other DBs
NCBI-GeneID:
121680125
NCBI-ProteinID:
XP_041915266
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All DBs
Position
13:complement(9905852..9911975)
Genome browser
AA seq
685 aa
AA seq
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MSGRHNNKLPTNLPQLQNLIKRDPQSYTDEFLQQYRHYQSNVQIFKHQPDKPNKEFEELV
MFLAQIGHCYQEQLASFPQELAELLLSHHTVLETSLRLTFCKALILLRNKELINPTNLLE
LFFELLRCHDKYLRKMLYTHIVTDIKNINAKHKNNKLNTTLQNFMYTMLRDSNPIAAKIS
LDVMVELYNRNIWNDAKTVNVITTACFSKVTKILVAGLKFFLGKDEDEKKDSDSESENEG
PSARDLMIRYNTGKKTSKNKKKMEKAMKVLKKHKKKKRAEVFNFSAIHLIHDPQDFSEKL
FRQLEDSKERFEVKIMMMELISRLVGIHELLLLNYYPFLQRFLQPHQREVTKILLCAAQS
SHQLVPPEVMESVVMTIANNFVTDRNSGEVMTVGINAIKEVVARCPLAMNEDLLQDLTLY
KAHKDKNVTMSARGLIQLFRSLNPHMLHRKDRGKPTESSIEAQIQSYGELGAKDYIPGAE
ILEVDKEEGDEDEDGWESASDEEDDDGEWVDVHHSSDEEQAGIAEKLQNIPLEERKAKAA
AVSTSRLLTQDDFQKIRLAQMAKDLNAAPGKGQKRKNVEIDDEEEEGGELLSLRAIERLH
KKPKSDKEARLATAMAGRTDKKDFIKKRNKLNPHASTSNKEKKRHKNFMMMRHSQNVRTK
GKRSFRDKQIALRDSLLKKRKHNRF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtagacataataacaaattaccaacaaatttgccgcaacttcaaaatctcata
aaaagggatccgcagtcatacacagatgagttcttacagcagtatcgacattaccagtca
aatgtccagatctttaaacatcagccagataaacccaacaaggagtttgaggagctggtt
atgttcctcgcccagattggacactgctatcaggaacagttggctagtttcccccaggag
ttggcagagctactcttaagtcatcatacagtgttggaaactagtctgcgattgacattc
tgcaaagccttaatcttactcagaaacaaagagttgatcaatcccacaaacctcctagag
ctgttctttgagttgttgcgctgtcatgataaatatctcagaaagatgttgtacacacat
attgtgacagatatcaaaaacatcaatgccaaacacaagaacaataaactgaacacaact
ctgcagaatttcatgtacactatgctgagagatagtaaccccattgctgcaaaaatatct
ctggatgtgatggttgagctctacaatagaaatatctggaatgatgccaaaactgtcaat
gtcataacaacagcatgtttctcaaaagtcacaaagatcttggttgctggactaaagttc
tttttgggtaaagatgaggatgaaaagaaggacagtgactctgaatcagagaatgagggt
ccaagtgcgagggacctcatgattcggtacaacacaggaaagaagacttcaaaaaacaag
aagaaaatggagaaagccatgaaagttctgaagaaacataaaaagaaaaaacgagcagag
gtcttcaatttctctgctatccacctcattcatgaccctcaagatttttcagagaaactt
ttcagacagctggaagactccaaggagcgctttgaggttaagatcatgatgatggaactc
atatccagactagtgggaattcatgagcttctcctcctcaactattatccatttctccaa
cgctttctacaaccacaccagagggaggtgacaaagatattgttgtgtgctgcacagtca
tcccaccagttggtgcctcctgaggtcatggaatcggtggtaatgaccatcgccaacaat
ttcgtcacagatcggaattcaggggaagtcatgacagtgggtatcaatgccatcaaggag
gtggtggcccgctgtcccctggccatgaatgaggacctgcttcaggatctaacactgtac
aaagcacacaaagacaagaatgtgactatgtcagccaggggcttgattcaacttttcaga
agtctgaacccacacatgcttcacaggaaagatcggggcaaacctacagaatcctccatt
gaggcacagatacagagctatggtgaactaggggcaaaggattatatccctggagcagag
atcctggaagtggacaaagaggagggagacgaggacgaggatgggtgggagagtgccagt
gatgaggaagatgacgatggagaatgggtggatgtccatcactcatcagatgaagaacaa
gcgggaatagcggaaaagctccagaacattccattggaggaaagaaaggccaaggctgcc
gcggtcagcaccagccgccttctcacacaggacgatttccaaaagatccgcctggcacag
atggccaaggatctcaatgctgcccctggcaaaggccagaagaggaagaatgtggagatt
gatgatgaagaagaggaaggtggggagttgctctcattaagagccattgaacgactgcat
aagaaacccaaatcagacaaggaagcacgactagccacagctatggctgggcgaacggac
aaaaaagacttcataaaaaagagaaataagctgaatccacatgccagcacaagcaacaag
gagaagaagaggcataagaactttatgatgatgaggcacagtcagaatgttcgaaccaag
ggcaaacgctccttcagggacaaacaaattgccctccgagattcactgctgaagaaaaga
aaacacaaccggttttaa
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