Alosa sapidissima (American shad): 121680166
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Entry
121680166 CDS
T11137
Symbol
thap1
Name
(RefSeq) THAP domain-containing protein 1
KO
K23203
THAP domain-containing protein 1/3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121680166 (thap1)
03036 Chromosome and associated proteins [BR:
asad03036
]
121680166 (thap1)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys2CysHis zinc factors
121680166 (thap1)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Gene silencing
Transposable elements
121680166 (thap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THAP
ADIP
LRIM1_dimer
HAP1_N
Mod_r
GeBP-like_DBD
PI3K_P85_iSH2
DUF16
DUF4140
CCDC-167
Rx_N
DUF4391
DivIC
DUF3450
FlxA
GrpE
Vac_Fusion
PUMA_CC
BLOC1_2
ABC_tran_CTD
Exonuc_VII_L
Sec2p
NPV_P10
ABC_tran_Xtn
Motif
Other DBs
NCBI-GeneID:
121680166
NCBI-ProteinID:
XP_041915317
LinkDB
All DBs
Position
13:complement(29515164..29519304)
Genome browser
AA seq
254 aa
AA seq
DB search
MVQSCSAYGCKNRYHKDKNISFHKFPLARPDVCGKWVAAMRRHNFKPTKYSNICSQHFTK
DCFKRECNNRVLKENAVPSLFSFSKLQVKGELLQQTYPAQVDLSLSFPSPEAEEVQSLAT
QPPPGDPGAIPAGPLGPVTVAAAESSQEEDESPEGLEGLQSSASVSCDHNYTVEDSLQQK
RRIEQLEEQVERLRKKLKTVQQRCRRQERQLQRLKTVGDLQKQVKDLALGGESYVILPKE
LYDVLKGIESADGL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggttcagtcttgttcagcgtatggatgtaaaaatagataccacaaagacaaaaatatc
tctttccacaaattcccgctcgcaaggccagatgtttgtggaaaatgggtagcagcgatg
agaaggcacaacttcaaacccacaaaatacagcaacatctgctcccagcacttcaccaag
gactgcttcaaacgcgagtgtaacaaccgcgtgctgaaagagaatgctgtaccatctctc
ttcagttttagtaaactacaggttaagggggagttgctgcagcagacgtaccctgcacag
gtggacctctccctgtccttcccctcacccgaggcagaggaggtgcagtcactcgccacc
cagccccctcccggcgaccctggagccatacccgccgggcccctgggaccggtcaccgta
gcggcggcggagagcagccaggaggaggacgagtcgcccgagggcctggagggcctgcag
tccagcgcgtcggtctcctgcgaccacaactacacggtggaggactcgctgcagcagaag
cggcgcatcgagcaactggaggagcaggtggagcgcctgcgcaagaagctgaagaccgtc
cagcagcgctgtcggcggcaggagcggcagctgcagcggctcaagacggtcggcgacctc
cagaagcaggtgaaggacctggctctgggcggcgagagctacgtcatcctgcccaaagaa
ctctacgacgtgctgaagggaatcgagtccgcggacggcctgtga
DBGET
integrated database retrieval system
