Alosa sapidissima (American shad): 121680258
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Entry
121680258 CDS
T11137
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide a
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121680258 (nefma)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
121680258 (nefma)
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
121680258
NCBI-ProteinID:
XP_041915436
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Position
13:complement(6533156..6538235)
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AA seq
922 aa
AA seq
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MRATHPTLTHRNTPHASTSHCTRHSHAHPPPAQMSYPMDSIGSRRMMDSRTTYVRSSGSP
SSGYRSQSWSRASPGSSVTYKRTVSTPVARTYSSAVLSSADSVDYGQTSILNGDYKRTNE
KEQLQGLNDRFAGYIDKVHYLEQQNRQIEAEIQALRQRQASQSKLGDVYDQELQELRAML
EQIHHEKAQIQLDTEHIEEDIQRLRDRFDEEARIREETEAIIRALKKDTTDSTLVKAELE
KKVQSLQDEIAFIRNNHEEEVNELLAQVQESQISMEKRDYQKTDLTEALREIRSQLEGHS
SQNLQQVEDWFMCKFSKLNEAAEQNKDAIKSARDEIADYRRQLQSKTIELESVRGTKDSL
ERQLTDIEDRHNSDMASLQETINQLDNELKSTKWEMARHLREYQDLLNVKMALDIEIAAY
RKLLEGEETHFSTYPYRQSVTTKISKVKSEPPKLKVQHKFVEEIIEETRVEDEKAEMDEA
LAEIANELAAALGGDQGGEEDEGEGEGEEGDEAGEEEGEKEEGDEKEEEAEAEEEEVVAA
SDAKLSTSAPGEEEEEEEEGGEKEAGDEEEEGEGGEEEKEGEEGEGEGEAEGGEEEGEKG
DKGEGGEDEAQEVEETVLSTKAPESKASPEKEKAESDKEEEKAEEEEEEEEEAGDDKAKS
DAGSGDEKETKAEPEKEAAKDEKKKEEKSEAPATKAEAPKTETSKTATPEAPKSESPKAE
SPKTQSPKSESPRAESPKPESPKAESPKSESPKPEAVKSEPTKAQAPKAPKTESPKKEEP
KAAESPKKEEKKAEPPKEEPPKAAPEKVEKKSEPEPAEKKEEKKEADKGKKEEEKEPAEK
EVISNGVEEESPSKDDPSQKVIITQTVETITTGEDGAKHVTKSVTVTETVKEVEEVVQEK
MVSTKKVEKHSSQAVKQVTEAE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagagccacacaccccacacttacacacaggaacacaccacacgcctccacctcacac
tgtacccgtcattcgcacgctcaccccccgcctgcccagatgagttacccgatggactct
atagggagtcggagaatgatggactccaggactacctacgtccgctccagcggctctccc
tccagcgggtatcgttcccagtcctggtcccgtgcaagccccggttccagtgtaacgtat
aagaggaccgtcagcacgccggtggcccgaacctacagctccgctgtgctcagctctgcc
gacagcgtcgactacggccagacatcaattctaaacggagactacaagcgcaccaacgag
aaggaacagctccaagggctcaacgaccgcttcgccggttacatcgacaaggtgcactac
ctggagcagcagaacaggcagattgaggcagagattcaggcactgcggcagagacaagcg
tcgcaatctaaacttggtgatgtttacgaccaggagctgcaagaactgcgcgccatgctg
gagcagatccaccacgaaaaggcgcagattcagctggacacggagcacatcgaggaagac
atccagaggcttagggaccgcttcgatgaggaagcccgtatcagggaggagacggaagcc
atcatccgtgcactgaagaaggacacgacagactcgacattagtgaaggcagagttggag
aagaaagttcagtcactgcaggatgaaatcgctttcattcgcaacaaccatgaagaagag
gtgaatgagctgctcgcccaagttcaagagtcgcagatcagtatggagaagagggactac
cagaagaccgacctcactgaggcgctccgggagatccgctcacagctggaagggcactct
tcccaaaatctacagcaagtagaagactggtttatgtgcaagttttccaagctgaacgag
gcggcggaacagaacaaagatgcaatcaaatccgcccgggatgagatcgcagactaccgt
cgtcagctccagtccaagaccatcgaactcgagtccgttcggggaacgaaggactcactt
gagagacaactcactgacatcgaggaccgacacaacagtgacatggccagccttcaggaa
acaatcaatcaactggacaatgaattgaagagcacgaaatgggaaatggctcgccacctg
cgcgagtaccaagatctactcaatgtcaagatggctcttgatatagagattgctgcttac
aggaaacttctagaaggggaggagacacacttcagcacttacccttaccgtcagtctgtc
accaccaagatctccaaggtcaaaagtgagccccccaagcttaaggtgcagcacaagttt
gtggaggaaatcattgaggagacccgtgttgaggatgaaaaggctgaaatggatgaggct
ttggccgagatagccaatgagctggctgctgctcttggaggagaccaaggcggagaggag
gatgaaggtgaaggagagggtgaggaaggtgatgaagctggtgaagaggagggagagaaa
gaggagggagatgagaaagaggaagaggctgaggcagaggaggaggaggtggtagccgct
agtgatgctaaactcagcacaagcgctcctggtgaggaagaggaagaggaagaggaagga
ggagaaaaagaggctggagatgaagaggaagaaggagagggtggtgaagaggagaaagaa
ggcgaggaaggagagggagaaggagaggcagagggaggagaggaggaaggagagaagggg
gataagggagagggaggagaggatgaggctcaggaggtggaagagaccgtgctgagcacc
aaggccccagagtcaaaggcctctccagagaaagagaaggcggaaagtgacaaagaagag
gaaaaagctgaagaggaagaagaggaggaagaagaggctggtgatgacaaagcaaaatct
gatgcaggaagtggtgacgagaaggagaccaaagcagagccagagaaggaggccgccaaa
gatgagaagaagaaggaagagaaatctgaagcacctgcaaccaaggctgaagccccaaag
acagagacctccaagactgccacacccgaggccccaaagagtgaatctccaaaagctgaa
tccccaaagacccagtccccaaagagtgaatctccaagagctgagtctccaaaacctgaa
tctccaaaggctgagtccccaaagagtgagtccccaaaacctgaagctgtgaagagtgag
ccgaccaaggcacaagctccaaaggcccccaagactgagagccccaagaaagaggagccc
aaagctgcagaatcacccaagaaggaggagaagaaagctgagcccccaaaagaggagccc
cccaaagctgcccctgagaaagtagagaagaagagtgaacctgagccagcagagaagaaa
gaagaaaagaaagaagctgacaagggcaagaaggaagaggagaaggagcctgctgagaag
gaggtgatctccaacggcgtcgaggaggagagcccatccaaagatgaccccagccagaag
gtgatcatcactcaaaccgtggagacaatcaccaccggagaggacggagccaagcatgtc
acaaagtcagtgactgtcacggagaccgtcaaggaggtggaggaagtggtccaggagaag
atggtctccaccaagaaggtggagaagcactcctcccaggctgtcaagcaggtcaccgag
gccgagtga
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