Alosa sapidissima (American shad): 121680286
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Entry
121680286 CDS
T11137
Symbol
tia1
Name
(RefSeq) nucleolysin TIA-1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121680286 (tia1)
03041 Spliceosome [BR:
asad03041
]
121680286 (tia1)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121680286 (tia1)
Spliceosome [BR:
asad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121680286 (tia1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Motif
Other DBs
NCBI-GeneID:
121680286
NCBI-ProteinID:
XP_041915468
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All DBs
Position
13:complement(14003712..14012693)
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AA seq
386 aa
AA seq
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MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHA
AASLAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIKAAFAPFG
RISDARVVKDMATGKSKGYGFVSFYNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
ATYETNTKHLSFEEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEIRVFPDKG
YSFVRFNSHEGAAHAIVSVNGTSIEGHVVKCYWGKETTEMVSPMQQVQMPQQNKLGFAAQ
PYGQWGQWYGNTQQIGQYVPNSWQVPAYGVYGQAWNQQGFNHLQAGAGWTGVGAISNGAM
VEPTQGVNGTMLANQSGMGTAGYHTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgaacagcccaagactttgtatgttggaaacctgtctcgcgacgtgaca
gaggcgctgatcatgcaactcttcgggcagataggaccctgcaagagctgtaaaatgatt
gttgatacggcaggtaatgacccatactgctttgtggagttctacgagcataggcatgct
gctgcctcactggccgcaatgaatggacgtaaaataatgggtaaggaggtcaaggtcaac
tgggccaccacacctagcagccagaaaaaagacacaagcaaccacttccatgtctttgtg
ggagacctcagtccagaaatcaccaccgatgacatcaaagctgcctttgcacccttcggg
aggatatctgatgctcgtgtggtgaaagacatggccacagggaagtctaagggctacggc
tttgtgtccttctacaacaaatgggacgcagaaaatgccatccaacagatgggcggccaa
tggctgggtgggcggcagatcagaaccaactgggccacgagaaagccccctgcacccaaa
gccacctacgagacgaataccaagcatctgtcttttgaggaagtggtcaaccagtccagc
cctagtaactgcactgtctactgtggaggagtcaccacaggcctgactgagcaattgatg
cgacagacgttctctcccttcggccaaatcatggaaatccgcgtgtttccagacaaaggc
tactcttttgtgaggtttaactcgcacgagggtgcagcccacgccattgtctctgtcaat
ggcacctccatagagggccatgtggtcaagtgttattggggcaaagagaccacagagatg
gtcagtcccatgcagcaggtacagatgcctcagcagaacaaactaggctttgctgcccag
ccctatgggcagtggggccagtggtacggcaacacccagcagatcggccagtatgtgccc
aacagctggcaggtacccgcctacggcgtctatggccaggcatggaaccagcagggcttc
aatcatttacaggccggggctggctggacgggggtcggagccatcagcaacggggccatg
gtggaaccaacacagggagtcaacggaacaatgctcgccaaccagtccggcatgggcacg
gctggctaccacacacactga
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