Alosa sapidissima (American shad): 121680365
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Entry
121680365 CDS
T11137
Symbol
pax8
Name
(RefSeq) paired box protein Pax-8 isoform X1
KO
K09293
paired box protein 8
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121680365 (pax8)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121680365 (pax8)
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Ortholog
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GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
HTH_Tnp_IS1
DUF6115
HTH_SB
Motif
Other DBs
NCBI-GeneID:
121680365
NCBI-ProteinID:
XP_041915654
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All DBs
Position
13:complement(15339670..15354688)
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AA seq
476 aa
AA seq
DB search
MWKTCTELSRPDAVKILARSDIIGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPC
DISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAW
EIRDRLLAEGVCDSDTVPSVSSINRIIRTKVQQSFNLPLDSKGLSPGHTLIPSSAVTPPE
SPQSDSLGSTYSISGLLGIPQATTEGKRSHDDSDQESCRLSVDSQSSGGGPRKQLRPEHF
PPTQHLDCGFERHHYPSDAFGSTTASKTEQALYPLSLINGSLEDGKSSLSTSSAAIGRNL
SAHQSYTVVADPLQPLPLCLKQEVSPEVTSSSPSPSIIANSAFLDLQAIQAPASVSNSCG
GSASHFSHAFNSFSHHAPVYGQFSSQSLIAGRDMVSSSLPGYPPHIPSAGQTGYSSSAIT
GMVAGADYSGQTYTHSPYTSYSEAWRFTNSGILGSPYYYSTASRAAAPSTAAYDHL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagacttgcacagagctgtctagaccagatgctgtcaaaattctagctagatcc
gacataattggtcatgggggccttaaccaactaggcggaatgtttgtgaatggccggccg
cttccggaggtgatccggcagcgcatcgtggacatggcgcaccagggcgtgcggccgtgc
gacatctcccgccagctgagggtcagccacggctgcgtcagcaagatcctgggacgatat
tacgagactggcagcatcaagccaggggtcatcggtggctccaagcccaaggtagccaca
cccaaagtggtggagaagatagccgaatacaagcggcagaaccccaccatgtttgcctgg
gagatcagagacaggctcctggccgagggggtgtgcgacagcgacaccgtgcccagtgtc
agctccatcaacagaattattagaacaaaagtgcagcagtccttcaacctgcctctggat
agcaaaggactgagccccggacacacactgatccccagctctgcggtcaccccgcccgag
tccccccagtccgactctctgggatccacctactccattagcggcctgctgggcattcca
caagccaccacggagggcaagaggagccacgatgacagtgaccaggagagctgtcggctg
agtgtggactctcagagcagcggaggcggccccaggaagcagctgagaccggaacacttc
ccccccacacagcacctggactgcggcttcgagcgccaccactacccctctgacgccttt
ggctccaccaccgccagcaaaacagagcaggctttataccccctgtccctcatcaatgga
agtctagaggatgggaagtccagcctgtcaacatcaagtgcagccatcggacgcaacctg
tccgcacaccagagttatactgttgttgcagatcccctacagcccctcccactctgtctg
aaacaggaagtgtcgcccgaggtgaccagctcgagcccctcccccagcatcatagccaac
tccgctttcctggacctccaagccattcaggcgccggcgtccgtcagtaacagctgtggc
ggctccgcctcccatttctctcatgccttcaactcattttcccatcatgctccagtctac
gggcagttcagcagccaatcactcatcgcagggagagatatggtcagttccagtctccct
ggctaccctccacacatcccctctgctggccagacaggctactcctcctccgccatcaca
gggatggtagcaggtgcggattactctggccagacctacacccactccccctacacctcc
tacagcgaggcatggagattcaccaactcaggcattctcggttcgccatattactacagc
actgcctcccgagctgcagccccctccaccgctgcctacgaccacctctag
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