Alosa sapidissima (American shad): 121680483
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Entry
121680483 CDS
T11137
Symbol
c6
Name
(RefSeq) complement component C6
KO
K03995
complement component 6
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121680483 (c6)
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Gene cluster
GFIT
Motif
Pfam:
MACPF
Kazal_C6
Sushi
EGF_C8A_B_C6
TSP_1
TSP1_spondin
Ldl_recept_a
Kazal_C7
StbA_N
Motif
Other DBs
NCBI-GeneID:
121680483
NCBI-ProteinID:
XP_041915818
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Position
13:complement(11413254..11435153)
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AA seq
1197 aa
AA seq
DB search
MCSAPNGRKSRPRTAANIFQIGKASPRDPERRESTESTRKAQRAVDDCRMTVQEFNTLVA
LYREQVISIGEISADCPSLRSQMQKTRVKGCNVARTAYQNLTVISGPEDGEIQPEICRLF
IQLQCCLEMYITEMLKSMCLLGVLQIHRKGNEPCPEPNVDCKMDESSDVPILEDRSSSPV
DFPHDAWMVCTDIENIERDIREMRNLLSKLRDTMPLPLKNQDDSSLLNLTPFPLVRQRKR
RFSGLCCLSICCPSVSGISMDHFSWLLFLFCGLASVPLISGCYCDNYPWTSWTSCSQTCN
HGTQSRRRLMRQDEYYWENNCNNMCVAHENRACNVEACPINCQLTSYGPWSECSPCAKKQ
FRIRSVETPAQFGGVDCTEPLMEERPCHSPKECRIEAINCKDLFKCNSGRCIDPSLECNE
QNDCGDNSDEQNCGQLNPVCKSKRRHTAIPGAELTGNGFDIMAEEMRGTVLDSSFLGADC
TLNRSKENRVVYRVPANIESYDLKVEYLEDFKNEDSVEIQSKPYSLIDEISSGPQVQESG
GGFNFYLFGRSSSHHSSRDSATKTTIKASQKKDSKFFRVHQVLATSTFKMKESDLYLSDP
FLKFLHHLPLEYNYPLYREVFQQFGTHYFSAGTLGGLYDILYQYNREELKNSGLKDEHVN
SCIRQESSFFILFFRKSSSSFSCGTNKMTEKHEGSFFKSSERSISRVKGGRSAETAALAW
EKDRVAPDSTTFTNWLKSTIDNPAVVEYELAPLINLVRGFPCAVTKRRHMVTALEDYLQE
FDSCKCAPCPNNARPVLSGTECLCVCQTGTYGSNCETRAPDYTSEAVDGRWSCWSAWSPC
DVNLKKHRSRRCNNPAPMRGGKVCQGPSRQTEECPISIFEKQNVCINDDDFVIEGDQKEV
SPESGCPKPKPPANSHLRINKRQYDFGEHEEFLCLTGFELEGYQYIHCLPDGTWKPATGQ
CIKKVCAKPSLPAEMTMFPAKAEYAVGESFGVACTAPGQSPSGSRYYTCTRSLSWEPLIP
EEIQCQEDKPFVPDSNCPRGEKQDGSGKCVCIPREECRSYKKDFCVLDAAADTFSMMSFC
GFHSGRCHGDRLFLASDGPCPSDSSSQDWARYRAQMSDQSAVQQACGSDTCYDWETCSSD
KCGCKFPRDCAKDAPGAYCVRMLRTKSQRSTSVCATASMKCLRMEMEILKEGPCDDA
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctgcaccgaacgggcgaaaaagccgccccagaaccgccgcaaacatttttcag
atcgggaaggcttctccgagagacccggagaggcgagagagtaccgagagcactcgcaaa
gcacagcgagccgtggacgactgcaggatgactgtgcaggagttcaacactctcgtggcg
ctgtatcgtgagcaggtcatctcaatcggtgagatctcggcagactgtccgtctctgcgc
tcccagatgcaaaagactcgcgtcaaaggatgcaacgtggcccgcacggcatatcaaaac
ctcactgtcatttcaggcccagaggatggggagatacagccggagatctgccggctcttc
atccagctgcagtgctgcctggagatgtacatcacggagatgctcaagtccatgtgtctt
ctgggggtcctgcagatccaccgcaaagggaatgagccttgtccagaaccaaatgtggac
tgcaagatggatgagagctctgacgttcctatcctggaagaccgctcttcttccccggtc
gacttcccacatgacgcatggatggtgtgcacagacatcgagaacattgaaagggacata
agagagatgaggaatcttctcagcaaactcagggacaccatgcctttgccattgaaaaat
caagatgacagtagtctgctgaatctcaccccgttcccactcgtgaggcagaggaagagg
cgcttctctgggctctgctgtctttctatctgttgtccatcagtctccggcatatccatg
gatcacttcagctggctcctgttcctgttctgtggtctggccagtgtcccactcatctct
ggctgctactgtgacaactacccctggacctcctggacgtcctgttcacaaacctgcaac
cacggcacacagagtagacgcaggttgatgcgtcaggatgagtactattgggaaaataac
tgtaacaacatgtgtgtagcccacgaaaaccgagcgtgtaatgtcgaggcgtgtccaatc
aattgtcagctgacatcgtatggtccatggtctgagtgctccccatgtgccaaaaagcag
ttccggatacggtcggtggagaccccagctcagtttgggggagtggactgcacagagccc
ctgatggaggagagaccctgccactccccaaaggaatgcaggatagaggcaatcaactgc
aaagacctgttcaagtgtaacagtggcagatgcattgaccccagcctggagtgtaacgag
cagaatgactgtggggataactcggatgagcagaactgtggccagctgaacccggtgtgc
aagagcaaacggagacacactgccatcccaggagctgagctcaccggaaatgggtttgac
atcatggctgaggagatgcggggcacagtcttggacagttccttcctgggagcggactgc
acgttgaatcggagcaaagagaatagggtcgtgtaccgcgtcccggcaaatatcgagagt
tatgacctcaaggtggagtatctggaagatttcaaaaatgaggatagcgtggaaattcag
agcaagccatattccctgatagatgagatatcttcaggtcctcaggtccaagaatctggc
ggcggcttcaacttctacttattcggccgctcaagtagtcaccactctagccgggactcc
gccaccaagactacaataaaggcatctcagaagaaggactccaagttcttccgcgtccac
caggttctggccacgtccacctttaagatgaaagagtcagacctgtacctctccgacccc
ttcctgaaattcctccaccatttgcccctggagtacaactaccccctctacagggaggtg
ttccagcagtttggtacccactacttctcagcgggaaccctgggtggactctatgatatc
ctgtaccagtacaaccgagaagagctcaagaactcaggtctgaaggatgagcatgtgaat
tcctgtatccgacaggagtcctccttttttatcctcttcttccgtaaaagctcatcatct
tttagctgtggcacaaataagatgacagagaaacatgaaggttccttctttaagtcgtcc
gagcggtccatctccagggtgaagggaggtcggtcagcagagactgcagctctggcctgg
gagaaggaccgcgtggccccagacagcaccaccttcaccaactggctcaagtccaccata
gacaacccggctgtagtagaatatgagctggcgccattaataaaccttgtgcgaggcttc
ccatgtgcggtcactaagaggaggcacatggtgaccgctctagaggactacctgcaggag
tttgactcctgtaagtgtgccccctgcccaaataatgcccgccccgtgctctcgggcact
gagtgcctgtgcgtgtgccaaacgggcacctacggctccaactgtgagacaagggcccca
gactacacctcagaggctgtggatgggcgctggagctgctggagtgcctggagcccctgt
gatgtcaatctgaagaagcaccgcagccggaggtgcaacaaccctgcacccatgaggggc
ggcaaagtctgccaggggcccagcaggcagactgaagagtgccctatctccatcttcgaa
aagcaaaacgtttgcataaacgatgatgattttgtgatcgagggggatcagaaagaggtg
tcccctgagtccggctgccccaaaccaaagcccccagccaacagtcacctcaggatcaac
aaacggcagtatgactttggcgagcacgaagaatttctgtgcttgactggcttcgagctg
gagggataccaatacatccactgcctgcctgacggcacatggaagcctgctacaggccag
tgcatcaagaaggtctgtgccaagccctctctcccagctgagatgaccatgttcccggcg
aaagctgagtatgcggtcggggagagctttggcgtggcctgtactgcccccggccagagt
ccctctgggtcgcgctattacacctgtacgaggagcctgagctgggagccactcatccct
gaggagatccagtgccaggaggataagccatttgtgcccgacagcaactgtcccagggga
gagaaacaggacggctccggtaaatgtgtgtgcatcccgcgggaggagtgccgctcatac
aagaaggatttctgtgtcctggatgcggcagcggacaccttctccatgatgtctttctgc
ggcttccactcggggcgttgccatggggaccggctcttcttggcaagcgacggaccgtgc
ccgagcgactcatccagccaggactgggcccgctaccgtgcacaaatgtctgaccagagc
gccgtccagcaggcctgtggctcggacacctgttatgactgggagacctgttcctcagat
aagtgtgggtgtaagttcccgcgtgactgcgctaaggacgccccgggggcatactgtgtg
aggatgctgaggaccaagagccagaggagcacgagtgtgtgtgccacggcctccatgaag
tgcctacggatggagatggagattctgaaggagggcccatgtgatgatgcatga
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