Alosa sapidissima (American shad): 121680491
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Entry
121680491 CDS
T11137
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121680491 (ythdc1)
Spliceosome [BR:
asad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121680491 (ythdc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121680491
NCBI-ProteinID:
XP_041915824
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Position
13:complement(29312678..29322803)
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AA seq
717 aa
AA seq
DB search
MAVDRRDEKDGELNVLEDILTEAPDQDDELYNPESEHDICDKKGSKRKNTRGDGQESKRL
RSSGHSTRQLMKRGGPPSGANGKKLTNPRGRHLPEEFYDDRKNHGARGSTSRGDPLKGHS
DKPLTRSRDAQRRIKPLMPELSEKLRRTSEESTGQASRSSKDDAQSEEYASDQETGSSAV
SSEGQRSDLEEEVEEEEEVMEDEEEEDGEKDGEEEEDEEEEVDEEEGYEIEEDGDQREEA
EQNDYDTRSEASDSRSESVSFSDGESVRSGSGSEASDEERKQKKHARGISPIVFDRSGSS
ASESYAGSEKKREKLPSSVRAVRKDQTSKLKYVIREARFFLIKSNNHENVSLAKAKGVWS
TLPVNEKKLNAAFRAARSVILVFSVRESGKFQGFARLCSESHHGGSPIHWVLPAGMNAKM
LGGVFKIDWICRRELPFTKTAHLSNPWNEHKPVKIGRDGQEIEPDCGTQLCMLFPPDESI
DLYQVIRKLRHKRRMHSESRSRGRPAHREPAPRDLGRRRPEEYDMHNRKRPRIDYPPEFP
QRPGFMQDPRNPPVDRRFSGVRRDVLINGSYNDYMREFHHSIGPPPPWQGMAPYPGMEQP
PHHPYYQHHAPPPQAHPSYSGHHPIPHDARFREKRVVRSSFPSLHDYDMRVDDFLRRTQA
GVSSRRSRPRERDRQRERERPRDARRDRERERGRDRDRERERMRDREREKERGRYRR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgacagacgagacgaaaaagatggagaacttaatgttctggaggatattctt
actgaagcgcctgaccaagacgacgaactctacaatccagagagtgaacatgacatctgc
gacaaaaaaggatccaaaaggaagaataccagaggagatggacaggaatctaagcgtttg
aggtcctcaggacactcaactaggcagctcatgaaaaggggaggtccgcctagtggggcc
aatgggaagaaactaacaaaccctaggggccgacacctccctgaggagttctacgatgac
cggaagaaccacggagcgaggggcagcacctccaggggagaccccctaaaaggacacagt
gacaaaccgctcacccgcagcagagatgcacagaggaggataaagccccttatgcccgag
ttgtccgagaaattacggcgtacgagtgaggagagcacaggacaggctagccggtcctcc
aaggacgacgcccagtcagaggagtacgcctccgaccaggagacgggcagctcagccgtg
tcctccgagggccagcgctcagacctggaagaggaggtggaggaggaagaggaggtgatg
gaagatgaggaggaagaagatggagagaaggatggcgaggaagaagaggatgaggaagag
gaggttgatgaggaggaagggtacgagatcgaggaggatggcgatcaacgggaggaggcg
gagcaaaacgactacgacacacgtagcgaggctagcgactcccggtctgagtcggtctcc
ttctcagatggcgagtccgtacgctccggatcaggctctgaagcctcagatgaggaaaga
aagcagaagaagcacgctagagggatatctccaatcgtttttgatagaagtggaagctca
gcttcagaatcatatgcaggttcagagaagaagcgagaaaagcttccatcttctgtccga
gctgttcggaaagatcagaccagcaagcttaaatacgttattcgagaagccagattcttc
ctcatcaaaagcaacaaccatgagaatgtttctctggccaaagcgaagggggtgtggtcc
acgctacctgtcaacgagaaaaagctgaatgctgccttccgagccgcaaggagtgtcatc
ctcgtcttctccgttcgggagagtgggaaatttcaaggttttgcccgtctctgctctgag
tcgcatcacggaggttcccccattcactgggtgctgccagcgggcatgaacgccaagatg
cttggcggagtcttcaagatcgactggatctgcaggcgtgagctgccattcaccaaaact
gcccacctatccaacccatggaacgagcacaagcctgttaagatcggacgtgatggacag
gagattgagccagactgtggaacccagctgtgcatgctgtttcctccagacgagagcatt
gacttgtatcaagttattcgcaaattgcgccacaagaggaggatgcactcggagtcccgc
tcccggggccgaccggcccaccgcgagcccgccccgcgcgacctgggaaggcgtcgtcca
gaggaatatgacatgcacaaccggaaacggcccaggattgactatcctccagagttccct
cagagaccaggcttcatgcaagatccacgcaatccacctgtggacagacgtttttctgga
gtcagacgggatgtgttaatcaatgggtcttacaatgattacatgagggagttccaccac
agcattgggccgcctcctccatggcaaggaatggcaccataccctggcatggagcagccg
ccacaccacccgtactaccagcaccatgcacctccaccccaggcccacccatcctactct
gggcaccatcccatacctcatgatgcccgcttccgtgagaaaagggtggtgcggtcctcc
ttccctagcctgcatgactacgatatgcgcgtggatgacttcttaaggcgtacccaggca
ggtgtgagcagcaggcggagtcgccctcgtgaacgcgatcggcagcgggagcgagagagg
ccaagggacgcgcgtcgggaccgggagagggagcgtgggcgggaccgtgaccgagagagg
gagcgcatgagagaccgggagagggagaaggaacgggggcgctaccgcagatga
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