KEGG   Alosa sapidissima (American shad): 121680515
Entry
121680515         CDS       T11137                                 
Symbol
wdr36
Name
(RefSeq) WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:asad00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    121680515 (wdr36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:asad03009]
    121680515 (wdr36)
Ribosome biogenesis [BR:asad03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    121680515 (wdr36)
SSDB
Motif
Pfam: Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Utp21 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40 WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_WDR75_1st CFAP251_N WD40_MABP1-WDR62_1st ASA1 Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_Vps41 NBCH_WD40 WDR90_beta-prop_4th DSE1_N WD40_RFWD3 PAC11 Beta-prop_SCAP Beta-prop_HPS5 TRM82_WD Beta-prop_LRRK2 Tricorn_2nd Zn_Ribbon_Topo Cytochrom_D1
Other DBs
NCBI-GeneID: 121680515
NCBI-ProteinID: XP_041915856
LinkDB
Position
13:14287302..14318764
AA seq 894 aa
MSAGSKKASVLFAGFRALGLYSNHLPHVVRYHKKHREFYVVTAVGKCFHTYNVKKLGIVA
VSNALPDDISCLAADRMLVFAAHGKTVVAFARNKEVVHTYSGHRDDVHLLLPFGDHFISV
DRENTVIIWEVEAEEEYLQISFDKVSFDVSAVMHPSTYLNKILFGSSQGGLQLWNIKSNK
LLYTFPGWTSAVTVLQQTPAVDVVGVGLASGQVIIHNIKFDETLMKFQQDWGPITSLSFR
TDGHPIMAAGSPVGHIGLWDLEEKKLIGQMRDAHDTAIAGLTFLLNEPLLITNGADNAIR
VWIFDTPGAEGRLLRCRLGHSAPPTKILHHGRNGQTILSAGQDGTLQSFSIVHERFNKSL
GHGTLNKKKAKKKGLKYDTAKLPAITSFASECARQSDWDGIVACHRGLVVATTWNHQKGS
MGAHKLEPDRFHHNRALNVHATAVDISSCGNFVVVAVSTGHIDTYNLQSGLHRGQYGKDK
AHAGPVRGVAIDGLNQLTISAGADHLLKIWKFKSHELLHTLSLESSPASTLLHRESGMLA
IALDDFTVNVLDIETKRIVRKFSGHRGQINDLTYSPDGRWLITASMDCTIRTWDLPSGCL
VDCFLVDAAAVSLTMSPTGNFLASSHVDNLGIFLWSNSTLCSVVSLRPLPADYEPAVVML
PGTFPSHDDEDEEEEDMDSSELADYISPAQLDQHLITLSLLPDSRWKNLLHLDVIKKRNK
PKEPPKVPKAAPFFIPTLPGLVPQFALPEAPQEDQSKVFNFGVLAQKSPFYVQLEKALLS
NNYDEPLNLLKEMGPSAIDTELRSLAPDMGGDVDTLTAFLRLISSMLDSRRDFDLAQAYL
ALFLKLHLRLLSTEPTLMQEAAQVSQRLEETWSHTQTQLNQSLCLLQYMKSALL
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgtctgctggtagtaaaaaagcaagcgtattatttgctggattccgggctcttggactg
tattcaaaccatcttccacacgtggtacgctaccacaagaagcatcgggagttctacgtt
gttacagctgtggggaaatgttttcacacatacaacgttaagaaacttggcatagttgca
gtcagtaatgcccttcccgatgatatatcttgtctggctgctgatcggatgctggtgttc
gctgcacatggcaaaactgttgtggcctttgccaggaacaaagaggttgtgcacacgtat
tctggccatagagatgatgttcaccttctgttaccttttggagaccatttcatctctgtg
gacagggagaacacagtcatcatctgggaggtggaggctgaagaggagtatttgcagata
tcatttgataaagtctcatttgatgtgtctgctgtgatgcaccccagtacctacctgaac
aaaatcctgtttggcagcagccagggaggacttcagctctggaacattaaatccaataag
cttctttacacattccctggatggacctcggcagtaacagtccttcagcagacacctgct
gtagatgttgtaggtgtgggcttggcgtctggacaggtgatcattcataacatcaaattt
gatgagacactgatgaagttccaacaggactggggaccaatcacgtccctgagcttcagg
acagatgggcatccaataatggccgccggaagtcctgttggtcacattggattgtgggat
ctggaggaaaagaagctgattggtcagatgagagatgcccatgacacagctattgctggt
ttgaccttcctcctcaatgaacccctcctcatcaccaatggtgccgacaatgccatcagg
gtgtggatatttgacactccgggagccgagggccgtctgctccgctgtcgccttggacac
agcgccccaccaaccaagattcttcaccacggccgcaatggccaaacgattcttagtgcg
ggtcaagatggcacgctgcagtccttttctattgttcatgagcgattcaataagagtttg
gggcatggaactcttaataagaagaaagccaaaaagaaaggcttgaaatatgacacagcg
aagctgccagccatcacatcatttgcttcagagtgcgctcggcagagcgactgggatggc
atcgtggcatgccatcgtggcctcgtcgtcgccacaacctggaaccaccagaagggctca
atgggcgcgcacaaactggagccggaccgcttccaccacaaccgggccctgaatgtgcac
gccacggctgtagatatttcctcatgtgggaactttgtggtggtggctgtctctaccggg
cacattgacacgtacaacctgcagtctggcctccacagaggtcaatatgggaaagacaaa
gctcatgccggcccggtgcgtggtgtggctattgacgggctcaaccagctgactattagt
gccggagctgaccatctcctcaagatctggaagttcaagagccatgagcttctccacaca
ctgagcttagagtcctcaccagcctctacgctgctgcacagggagagtggaatgctagcc
attgctttggacgacttcactgtcaacgtcctggacatcgagaccaaaagaatcgtccgc
aagttctcaggacatcgtgggcagatcaatgacttgacgtatagcccagatggccgctgg
ttgataacggcttccatggactgcaccatccgtacctgggacctcccctctggctgttta
gtggactgctttctggtggacgctgcagcagtaagcctcacaatgtcccccacaggaaat
ttcctggcgtcctctcacgtcgacaacctgggtatcttcttatggtcaaacagtaccttg
tgcagtgtggtgtcactgcgccccctacctgcagactatgagcctgcagttgtcatgctg
cctgggacattccccagtcatgacgatgaagatgaggaagaggaggacatggacagctct
gagctggccgattacatctctccagcgcagcttgaccagcacctcatcaccctctccctg
ctgcctgactcacgctggaagaacctgctccatcttgatgtcatcaagaaaagaaacaag
cccaaggagcctcccaaagtgccgaaggcggcacccttcttcattcccaccctccctggc
ctggtgccccagtttgctctcccggaggccccccaggaagatcagtccaaagtctttaat
tttggagttctggcccaaaagtccccattctacgtgcagttggagaaggctttgcttagc
aacaactacgatgagcccctgaatctgctgaaggagatgggcccttcggccatcgacacc
gagctacgcagcctggcccctgacatgggcggagacgtggacactctgacggccttcctc
aggttgatcagcagcatgttggactccaggagggactttgatctcgcccaggcctacctg
gccctcttcctaaagctgcacctccgcctgctgtcgacggagcccacgctgatgcaggag
gcggcacaggtctcgcagaggctggaggagacctggagccacacacagactcagctcaac
cagagcctgtgcttactgcagtacatgaagagtgccttactataa

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