Alosa sapidissima (American shad): 121680540
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Entry
121680540 CDS
T11137
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asad02000
]
121680540
Transporters [BR:
asad02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121680540
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121680540
NCBI-ProteinID:
XP_041915874
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Position
13:23002471..23012320
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AA seq
579 aa
AA seq
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MDPPEGHGAVSVQQRGTWSRRLEFLLASLGYAVGLGNVWRFPYLCYRSGGGAFFIPYIIM
LFLCALPMLLMEFTIGQFTQSGPIHAFMKICPLLKGVGLGTLVVSFVISAYFNTLMSWTL
FYLFNSFSSPLPWQTCNNTWNVPESCSAEFTVNDTSQQSASQQFFNYRLLDVSEGLEHMG
SVRWEVLGCLILAWAIEYLSIFKGIKLTGKVVYFTALFPYTILIILLVFTCRLPGAADGA
LFFLTPKWHKLKEVQVWIDALSQVFFSIGVGFGVMISMASYNNYNNNILRDSLIVALANS
ATSIFSGFVVFSALGYMAHIRSVSVEDLAVGGPGLAFLVYPEILATMPVPQLWAFLFFLM
LLCLGLDSQFAHLELIATTMMDCVGPKIPPSLRRREVLVLLVCLPSFLVGLPCVFQGGVY
VFQLMDHYTVAVAVLVMTVMEIAAISWILGVQRFSMMLTSMLGKSTNMYFKICWMVLTPL
LVLAVLVASIVQHTPPRYEKWYQFPDWSKAVGWMLTMASIICIPLGALHELYTRKGSLME
RLRSSVTPSLELDVPPASHQEQEICLSSRSEEACLHSSI
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacccacccgaaggccatggagctgtgtccgtacagcagagaggcacctggagccgg
cggctggagttcctcctggcctccctcggctatgcagtgggcttggggaacgtctggagg
tttccctacctgtgctatagaagtggaggaggtgcattcttcataccctatatcatcatg
ctgtttctctgcgcattgccgatgttgctgatggagtttaccattggccagttcacacag
agtggacctatacacgcttttatgaaaatatgtccattgctcaaaggagtaggactgggc
actctggtggtttctttcgtcatcagtgcctacttcaacaccctcatgagctggaccctg
ttctacctcttcaactccttcagctcccctctaccatggcagacgtgcaataacacctgg
aatgttccagaaagctgttccgctgagtttactgtcaatgacacgtcccaacagtcagcc
agtcagcagttctttaactacaggcttctggatgtcagtgaaggtcttgaacacatgggc
agtgtacgctgggaagtgttagggtgcctcattctcgcctgggccatcgagtacctcagt
atcttcaaagggatcaaactcactggcaaggtggtgtacttcacggcgctgttcccctac
accatcctcatcatcctgctggtgttcacctgcagactgccgggggcagcagatggcgcc
ctgttcttcctcacgcccaagtggcacaaactcaaagaggtccaggtttggattgacgct
ctgtcacaagtcttcttctccatcggcgtgggctttggagtcatgatctctatggccagc
tataataactacaacaacaacatactcagagattctctcatcgtagccttggccaactca
gccaccagcatcttctctggatttgtcgtcttttcggcccttgggtacatggctcacatc
cgtagtgtcagtgtggaggatctcgctgtcggagggcctggccttgcatttctggtgtat
cctgagatcttggccaccatgcctgttccccagctgtgggccttcctcttcttcctgatg
ctgctctgtctgggactggacagtcagtttgcacacttggagctgatagccaccacaatg
atggattgtgtcggtccaaagatccccccgtctctaaggcgaagggaggttctggttctg
ctggtgtgtttacccagcttcctggtgggactgccgtgtgtcttccagggtggggtgtat
gtgttccagctgatggaccactacactgtagcagtcgcagtcctcgtaatgaccgtgatg
gagattgctgccatcagctggatattaggagtgcaaagattctccatgatgctcacaagt
atgttgggaaaatctacaaatatgtacttcaagatttgttggatggtcctcacaccactg
ttggtgttggctgtattagtggccagtatagtgcagcacacccctcctcgctatgagaag
tggtaccagttccctgattggtccaaagctgtgggctggatgttgactatggcttccatc
atctgcatccccctcggagcactgcatgaactctacaccaggaagggctctctcatggag
aggttgaggtcctcagtaacccccagtctggagctggatgttcccccagcatcccatcag
gaacaggagatctgcctgtccagcagatctgaagaagcctgcttacacagctcaatatga
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