Alosa sapidissima (American shad): 121680568
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Entry
121680568 CDS
T11137
Symbol
cercam
Name
(RefSeq) probable inactive glycosyltransferase 25 family member 3
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00310
Lysine degradation
asad00514
Other types of O-glycan biosynthesis
asad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121680568 (cercam)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121680568 (cercam)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
asad01003
]
121680568 (cercam)
Enzymes [BR:
asad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
121680568 (cercam)
Glycosyltransferases [BR:
asad01003
]
O-Glycan biosynthesis
O-linked Gal type
121680568 (cercam)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
121680568
NCBI-ProteinID:
XP_041915916
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Position
13:24793171..24808996
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AA seq
593 aa
AA seq
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MCTTMFLAVLVLASIFATSKCYFSEENFTEESKMQQPTVVIAIIARNAAHSLPFYLGALE
RLNYPKDRISIWAATDHNSDNTTAVLREWLSVMQEHYHYIEWRPKDKPIAYPGELGPKHW
PNGRYEYLMKLKQGALTFAKKRWADYILYADTDNILTNPETLNLLMAENKSVIAPMLDSQ
SAYSNFWCGITPQGYYRRTAEYFPTKHRHRQGCYPVPMVHSTVLLDLRKEGTKKLAFHPP
HKDYSWPFDDIIVFAFSCRASEVQMYICNKERYGYLNVPAKPHQTVEDDRINFVHLYQES
LIDGPPMYHSGFIHQELKQTDLMGFDEIYLINLQRRPERRERMLWSLYELEINAKVVDAV
DGGALNSSDIKLLGVNLLPGYYDPFSGRTLTKGEVGCFLSHYYIWKEMVDNQMDKALIFE
DDVRFQGNFKRRLLRLMDEVEKVELDWDIIYLGRKQVKPEDEEVVENVRNLVVAGYSYWT
LSYAISLQGAQKLINAEPLSKMMPVDEFLPIMYDKHPNEAYKSQFPNRNLQAYSTRPLLV
QPAQYAGDPDWVSDTETSTLWDDDAVRTDWRGSHKTLKGNPQAGLHSAYKDEL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccaccatgttccttgccgttttagtgcttgcgtctattttcgcaacctcaaaa
tgctacttttcagaggaaaacttcaccgaagaatcaaagatgcagcagcctactgtcgtg
attgctattatcgctagaaatgctgcccattcgttgccgttctatctcggtgctctggag
aggctgaactacccgaaagaccgcatctccatttgggcagcgacagaccacaactcggac
aacaccaccgccgttctgagagagtggctgagcgtcatgcaggagcactaccattacata
gagtggaggccaaaggacaaacccatagcctaccctggtgagctggggcccaagcactgg
ccgaacggccgatatgagtacctgatgaagctgaagcagggtgccctcaccttcgctaag
aagcgctgggccgactacatcctgtatgctgacacagacaacatcctgaccaacccggag
actctaaatctgctgatggccgagaacaagtccgtcattgcccccatgctggactctcag
agcgcgtactccaacttctggtgcggcatcaccccacagggatactaccggcgcacggcg
gagtacttccctaccaaacatcgccaccggcagggctgctacccggttcccatggtgcac
tccaccgtcctgctggacctgcggaaggagggcaccaagaagctggccttccaccccccg
cacaaagactactcctggcccttcgatgatatcatcgtctttgccttctcctgtcgggcc
tctgaggtccagatgtacatctgcaacaaggagcgctatggctacctgaacgtgccggcc
aagccccaccagacggtggaagacgaccgaatcaacttcgttcatctctaccaggagtcc
ctgattgacgggcctcccatgtaccactcgggcttcatccaccaggagctcaaacagacg
gacctcatgggctttgacgagatctacctgattaacctgcagaggcgtccggagcggcga
gagaggatgttgtggtcactgtacgagctggaaatcaatgctaaagtggtggatgcagtg
gacggaggagctctgaacagcagtgacattaagctcctgggagtgaatctgttgccaggg
tactatgatcccttctctggccgcaccctcactaaaggagaggtgggctgcttcctcagc
cactactacatctggaaggagatggtggacaatcagatggacaaggctctgatcttcgag
gacgacgtgcgtttccagggaaacttcaagcgacgtctcctgcgtctcatggacgaggtg
gagaaggtggagctggactgggacatcatatacctgggccgtaagcaggtgaagccggag
gacgaggaggtggtggagaacgtgcgtaacttggtcgtggctggctactcctactggaca
ctctcctacgccatctccctgcagggggcccagaagctcatcaacgcagagccgctgtcc
aagatgatgcctgtcgacgagttcttgcccatcatgtatgacaagcacccaaatgaggcc
tacaagtcccagttccccaaccgtaatctgcaggcctactccacacgccccctgctggtc
cagcctgcgcagtatgccggcgacccagactgggtgagcgacacggagacgtccacgctg
tgggacgacgacgcggtgcggaccgactggaggggctcgcacaagacgctgaaggggaac
cctcaggccggactgcacagcgcctacaaggacgaactgtga
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